Labrenzia sp. VG12: CHH27_16480
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Entry
CHH27_16480 CDS
T04984
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00061
Fatty acid biosynthesis
labr00071
Fatty acid degradation
labr01100
Metabolic pathways
labr01212
Fatty acid metabolism
labr02024
Quorum sensing
labr04146
Peroxisome
Module
labr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CHH27_16480
00071 Fatty acid degradation
CHH27_16480
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CHH27_16480
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHH27_16480
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
labr01004
]
CHH27_16480
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
labr04147
]
CHH27_16480
Enzymes [BR:
labr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CHH27_16480
Lipid biosynthesis proteins [BR:
labr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CHH27_16480
Exosome [BR:
labr04147
]
Exosomal proteins
Exosomal proteins of breast milk
CHH27_16480
Exosomal proteins of breast cancer cells
CHH27_16480
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
YwhD
Motif
Other DBs
NCBI-ProteinID:
ASP34638
UniProt:
A0A222F6S4
LinkDB
All DBs
Position
complement(3566280..3568265)
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AA seq
661 aa
AA seq
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MVGSASASSRGEDTFPKILLQNAKVFGDRTAFREKDFGIWQSWTWSEVLEELRAFSIGLK
SLGLKPGDKIAIVGSNRPRLYWSMVAAQAIGAVPVPVYADSVAEEMAYVLGHAEVTFAVV
EDQEQVDKLLSMSEDVPSLRHVIYDEARGLRDYDHTQLHDYASVQEIGRDLLKKTASAAD
DWASGFSGGKGSDIAVMLYTSGTTGRPKGVMLSFDNLVISARNANVFDNLNETEEVLAYL
PMAWIGDHVFSLAQSFTAGYCVNCPESMDTIDVDRREIAPTYFFAPPRVFENMLTMIMVR
MEDAGKTKRKMFDFFMGVARKVGEKILNGEEVAFKDRMLYGLGEVFVYGPLKNRMGLTRM
KVGYTAGEAIGPEIFQFYRSLGLNLKQLYGQTEASVYITLQPDGEIFGDTVGKPAPDVEL
KIADSGEVMYRSPGVFVGYFKNDEATASTKTQDGWVHTGDAGIIAENGHLKIIDRAKDVG
KLNDGALFAPKYIENKLKFFPNIKEAVAFGHEKDMVAVFINIDLTAVGSWAERNNVNYAS
YQELAANPDVYGMIESHVDQVNRDLSQEPMMAGAQIKRFLILHKELDADDGELTRTQKVR
RSFIAERYAPLIEALYDGSTSKHVRTEVTFEDGRKGAIEATVEIRDMTAHDAAKGMQEAA
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggtagggtcggccagcgcgtcatcgcgcggggaggacacctttccgaaaatccttctg
caaaacgcgaaggttttcggtgaccggaccgcgttccgggaaaaggatttcgggatctgg
caaagctggacctggtccgaggtgttggaagagctccgcgcattttccatcggattgaag
tctctggggctgaagcctggagacaagattgccattgtcggctcgaaccggccacggctc
tactggtcgatggtcgccgcccaggcgatcggggccgtacccgtgccggtctacgcggac
agcgtggcggaggaaatggcctatgtcctggggcatgccgaagtcacctttgcggtcgtt
gaagaccaggagcaggtcgacaagctgctgtccatgtccgaggacgtgccgtcgctgcgg
catgtgatctatgacgaggcgcgcggcctcagggattacgaccacacccagctgcatgat
tacgcctccgttcaggaaatcggccgtgacttgttgaaaaagacagcgtcggcagccgat
gactgggcctcgggcttttccggtggcaagggctccgacattgccgtcatgctttatacg
tccggcacgacgggccgaccgaaaggcgtgatgctgtccttcgacaacctggtcatttcg
gcccggaatgccaacgtcttcgacaatctgaacgagaccgaggaagtgctcgcctacctg
ccgatggcctggatcggcgaccacgtcttctcgctcgcgcagtccttcaccgcaggctat
tgcgtcaattgtccggaaagcatggatacgatcgatgtggaccggcgcgagatcgcgccg
acctacttctttgcaccgccccgggtctttgaaaacatgctgaccatgatcatggtgcgc
atggaagatgccggcaaaaccaaacgcaagatgttcgacttcttcatgggcgttgcgcgc
aaggtcggtgagaagatcctgaatggcgaggaggtcgccttcaaggaccgcatgctctac
gggcttggcgaggtctttgtctatggaccgctgaaaaaccggatgggcctgacccgcatg
aaggtcggctacacggccggtgaggccatcggtccggaaatcttccagttctaccgctca
ctcgggctgaacctgaagcagctctacggtcagaccgaagccagcgtgtacatcaccctg
cagccggacggcgagatcttcggtgacacggtcggaaagcccgctccggatgtcgagctg
aaaatcgccgacagcggcgaggtgatgtatcgctctcccggcgtcttcgtcggctatttc
aagaatgacgaggcgaccgccagtacaaagacgcaggatggctgggtgcataccggggat
gcgggcatcattgccgaaaacggccacctgaagatcatcgaccgcgccaaggatgtcggc
aagctgaacgatggggcgctgtttgcgcctaaatacatcgagaacaagctcaagttcttc
ccgaacatcaaggaggccgtcgccttcggtcacgagaaggacatggtggcggtgttcatc
aacatcgatctgaccgccgtcggatcctgggcggagcgcaacaacgtcaactacgcgtcc
taccaggaactggctgccaatccggatgtctacggcatgatcgaaagccatgtggaccag
gtcaaccgggacctgtcgcaggagccgatgatggcaggcgcacagatcaagcgcttcctg
atcctgcacaaggaactggacgccgatgacggggagctgacccggacacagaaagtccgc
cgcagtttcatcgccgagcgctatgcgccgctgatcgaggcgctttacgacggctcgacg
tccaaacatgtgcgcacggaggtcacgttcgaggacggccgcaagggcgcgatcgaggcc
actgtcgagatccgcgacatgaccgctcatgacgctgccaagggcatgcaggaggccgcc
gaatga
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