Labrenzia sp. VG12: CHH27_17120
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Entry
CHH27_17120 CDS
T04984
Name
(GenBank) transporter
KO
K10439
ribose transport system substrate-binding protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr02010
ABC transporters
labr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHH27_17120
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CHH27_17120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_17120
Transporters [BR:
labr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CHH27_17120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ASP34747
LinkDB
All DBs
Position
complement(3711091..3712107)
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AA seq
338 aa
AA seq
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MGALKVKAILASAAVSAAIMTAAPAAANGLKCEPGETYIMNVMVSGHPYWVPVYQGFKQA
AEAFGCETIFSGTPDYDITKQIASFEQDMVKQPAGILLHPMQSDPFIEPINRAMENGTEI
VTFAADSPKSNRTAYITSDNLAEAKFAAEEIVSQVGDSAEYAVLENPGQSNHDLRVTALI
SYMEENYPNMKLVGRQATNQDSNAAYRATGSILQANPNLAALWIPEAGSAEGAVAAVLEA
EAKVLIMHADVTPTTLEHIKAGNIHMALNPNQGMQGFMGFMATFLAAHSDVFDPFNDYKV
SGYNPVQIPYVDNGFAVITKENADSFDLNVYMEGRDPS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctttgaaagtgaaggccattctggcatcggcagccgtgtctgccgcgatcatg
actgcagcaccggcggctgcaaatggtttgaaatgcgagccgggcgaaacctacatcatg
aatgtgatggtctcgggccatccttactgggtgccggtctatcagggcttcaagcaggca
gccgaagcgttcggttgcgagaccatcttttccggcacgccggactacgacatcaccaag
cagattgcctccttcgaacaggacatggtgaagcagccggctggtatcctgctgcacccg
atgcagtcggatccgttcatcgagccgatcaaccgcgccatggagaacggcaccgagatc
gttacttttgcggcggattcgccgaaatccaaccgcaccgcctacatcacttccgacaac
ctggccgaagccaagttcgccgcagaggagatcgtcagccaggtgggcgacagtgccgaa
tatgcggttctggagaatccgggccagtccaatcacgatcttcgggtcacggcgctcatt
tcctatatggaagagaattacccgaacatgaagctggtcggccggcaggccaccaaccag
gacagcaacgccgcctaccgggcaaccggctcgatcctgcaggccaacccgaacctggca
gcactctggattccggaagccggttccgcggaaggggccgttgcagcagtgctggaggct
gaagccaaagtattgatcatgcacgccgatgtcacgccgaccacgctggaacacatcaag
gccggcaacatccacatggcgctcaatccgaaccagggcatgcagggtttcatggggttc
atggccacctttctggcagcgcattccgacgtgttcgaccccttcaacgactacaaggtc
tccggctataacccggtgcagatcccttacgttgacaacggctttgccgtgatcaccaag
gagaacgccgacagcttcgacctcaatgtctacatggaaggccgcgatcccagctga
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