Labrenzia sp. VG12: CHH27_17825
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Entry
CHH27_17825 CDS
T04984
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
labr03000
]
CHH27_17825
Transcription factors [BR:
labr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CHH27_17825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
HTH_36
wHTH_Par
Sigma54_CBD
DUF2481
HTH_11
TetR_C_25
HTH_23
HTH_22
Motif
Other DBs
NCBI-ProteinID:
ASP34867
LinkDB
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Position
3861277..3861879
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AA seq
200 aa
AA seq
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MSVSDQKKKQIVEAAIAEFQEKGYAGASMDRISERAQVSKRTVYNHFDSKEVLFKAINQC
LADQINSALELPYDPDLPIRDALIRLGWAEGELMINPCFMSLARMIMSETIRDPELAEDM
NQRMTKLVVFTEYVERATREGKLRTDNPEVAAAQFLGLIKSRAFFPNIHIGRVPEREEVS
NIIEESVDMFLARYGVKETV
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtatccgaccagaaaaaaaagcagattgttgaggcggccatcgctgaattccag
gaaaagggctacgcgggcgccagcatggaccggatttccgaacgggcccaggtgtccaag
cgcacggtctacaatcacttcgacagcaaggaagtgctgttcaaggcgatcaaccagtgc
ctggccgaccagatcaattccgccctggaactcccctacgacccggacctgccgatccgc
gacgccctgatccgcctcggctgggcggaaggcgaactgatgatcaatccctgtttcatg
agccttgcccgcatgatcatgagcgagaccatccgcgacccggagcttgccgaggacatg
aaccagcgcatgaccaagctggttgtttttaccgaatatgtcgagcgggccaccagggaa
ggcaagctcagaacagacaatccggaagtcgctgccgcgcagttcctcggcctgatcaag
tcccgcgccttcttcccgaacatccatatcggccgggtgccggagcgggaagaagtttcc
aacatcatcgaggaaagcgtcgacatgttcctggcgcgctatggggtcaaagaaacggtc
tga
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