Labrenzia sp. VG12: CHH27_18560
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Entry
CHH27_18560 CDS
T04984
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00730
Thiamine metabolism
labr01100
Metabolic pathways
labr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CHH27_18560
Enzymes [BR:
labr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CHH27_18560
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ASP36962
UniProt:
A0A222FEA0
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All DBs
Position
complement(3999043..4000866)
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AA seq
607 aa
AA seq
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MTTAAKTPKPDVTQGALPASTKVYKPGLIYPQLRVPMREIAVHPTAGEPPVTVYDASGPY
TDPAQLIDISKGLPRLRADWIAGRGDTEAYPGRTVQPEDNGFATGDRLTPAFPDLPMPRR
ACAGKAVTQIAYARAGIITPEMEFVAIRENLGRAALKAQSARDGESFGAAIPDFVTPEFV
REEIARGRAILPANINHPEAEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWATRWG
ADTVMDLSTGRNIHNIRDWILRNAPVPIGTVPLYQALEKVGGVAEELTWEVFRDTLVEQA
EQGVDYFTIHAGVRLSHIPLTVDRVTGIVSRGGSIMAKWCLHHHKESFLYEHFEEICDIA
RAYDVAFSLGDGLRPGSIADANDAAQFAELQTLGELTQIAWAKDCQVMVEGPGHVPMHKI
RENMDRQIEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLG
LPDRDDVKTGVITYKIAAHAADLAKGHPAAKIRDDALSRARFEFRWEDQFNLSLDPETAR
AFHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRDAARQEGARQEGMEAMAARYRNGGD
LYMPKGG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgccgccaagacccccaaaccggatgtcacgcaaggcgcgctgcccgcctcg
accaaggtttacaaacccggtctgatctatccgcagctgcgcgtgccgatgcgcgagatt
gccgttcatccgacggccggcgagccgccggtaacggtctatgatgcgtcgggcccctat
accgatccggcgcaattgatcgacatttcaaaggggttgccgcgccttcgcgcagactgg
atcgccgggcgcggcgacaccgaagcctatccgggccgcaccgttcagccggaagacaac
ggctttgccacaggcgaccggctgacgccggcctttcccgacctgccaatgccgcgccgg
gcctgcgccggcaaggcggtcacccagatcgcctatgcccgcgccgggatcatcacgccg
gaaatggagttcgtcgcgatccgggaaaatctcgggcgcgcggctttgaaggcgcaatca
gcgcgggacggcgaaagcttcggtgcggcgatcccggactttgtgacgccggaattcgtt
cgcgaggaaatcgcccgcggccgggcaatcctgccggcaaacatcaaccatccggaagcc
gagccgatgatcatcggccgcaatttcctggtgaagatcaacgccaatatcggcaattcc
gccgtcacgtcgtcgatggccgaggaggtcgagaagatggtctgggcgacccgctggggc
gcggacaccgtcatggatctgtcgaccggccgcaacatccacaacatccgggactggatc
ctgcgcaacgcgcccgtgccgatcggcaccgtgccgctttaccaggcgctggaaaaggtc
ggcggcgttgccgaggagctgacctgggaggtatttcgcgacacgctggtcgagcaggcc
gaacagggcgtcgattatttcacgatccacgcaggcgtccgcctctcccatattccgctc
accgtcgatcgtgtcaccggcatcgtctcgcgtggcggctcgatcatggccaagtggtgc
ctgcatcatcacaaggagtcgttcctctacgagcatttcgaggagatctgcgatattgcc
cgggcctatgacgttgccttttcgcttggtgacggtctgcgtcccggctcgattgccgat
gccaatgatgccgcgcaattcgccgagctgcagaccctcggagagctgacgcagatcgcc
tgggcgaaggactgtcaggtgatggtcgaagggcccggtcatgtgccgatgcacaagatc
agggagaatatggaccggcagatcgaggcctgcggcgaagcgccgttctatacgcttggg
ccgctgacgaccgatatcgcgccaggttatgatcacatcacatcgggcatcggcgccgcg
atgatcggctggtacggcacggccatgctctgttatgttacgcccaaggagcatcttggt
cttccggaccgcgacgacgtgaaaaccggagtcatcacctacaagatcgccgcccatgcc
gcggatctcgccaagggccatccggcggcgaagatccgcgacgatgccctgtcgcgggcc
cggttcgaatttcgctgggaggaccagttcaacctgtcgctggatcccgaaactgcccgt
gccttccacgacgagaccttgccgaaagaggctcacaaggtggcccatttctgctccatg
tgcgggccgaaattctgctccatgcggatctcgcacgatatccgcgacgccgcccgccag
gaaggcgcgcgccaggaagggatggaggcaatggctgccagataccggaacggcggcgac
ctctatatgccaaagggcgggtaa
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