Labrenzia sp. VG12: CHH27_19030
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Entry
CHH27_19030 CDS
T04984
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
labr03009
]
CHH27_19030 (rsmB)
Enzymes [BR:
labr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
CHH27_19030 (rsmB)
Ribosome biogenesis [BR:
labr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CHH27_19030 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltransf_11
FtsJ
Methyltransf_31
RsmF-B_ferredox
Methyltransf_12
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ASP36975
LinkDB
All DBs
Position
complement(4106675..4108012)
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AA seq
445 aa
AA seq
DB search
MPSEDTQEKPGFAARKVAADILGNVVHKKRPLDGELDVASGHSGFRALAGNDRALVRAIV
GAALRHRGEILEILERLLDRPIPEKTGRVQDILHVAVSQMLYLDIPDRAAVSLAVDHAGL
DRRARPYKGLVNGVLRRLGRERDDITGDLEPDLLNTPDWLMDSWSEAYGTETARQMSAAH
QQEAALDLTVKTDPAGWAEKLEGQVVAAGSVRLAKKAAVETLEGFEDGSWWVQDAAAALP
ARLLGDVQDLNVADLCAAPGGKTAQLAAAGAEVTAVDISKGRLKRLEENMTRLGLTVRTV
ASDLRQFEPEAPFDAVLLDAPCSATGTIRRHPDVPWIKKPYDIEKLSEIQKELLDRVVDW
VRPGGLIVYCTCSLEAAEGEAQADAFIGRLGDRIAPVPVTPDEVGGLAHLVTNTGYLRCL
PCHEADKTRENTGLDGFFAARFRRL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagaagacacacaggaaaagccgggctttgccgcgcgcaaggtcgcagccgat
attctcggtaatgtcgttcacaagaaacgccctctggatggcgagctcgatgttgcttcc
ggtcactctggttttcgggccttggccggcaatgatcgcgcgctggttcgggccattgtc
ggggcagccctgcggcaccggggtgaaatcctggagatcctggagcgtttgctcgaccgg
ccgatcccggaaaagacaggccgggtgcaggacatccttcatgtcgccgtcagccagatg
ctttatctcgacattcccgaccgcgctgccgtgtcgcttgccgtcgaccatgccggtctc
gaccggcgggcgcggccctacaagggcctggtcaatggcgtcttgcgccggctcggacgg
gagcgcgacgacatcacaggggaccttgaaccggatctcctgaacacgcccgactggctg
atggacagctggtctgaggcctatggcaccgaaaccgcgcgccagatgtctgccgcacat
cagcaggaggctgcgctcgacctgacggtcaagacggacccggccggctgggcagaaaag
ctcgagggtcaggtcgttgccgcgggcagtgtccggctcgccaaaaaggcggccgtcgag
acgctggagggatttgaggacggcagctggtgggttcaggatgccgctgctgccttgccg
gcgcggctactgggcgacgttcaggatctcaacgtggcggatctttgcgccgcgcctggt
ggcaagaccgcccagctggcggcggccggggccgaggtgacggcggtcgatatctccaag
ggccgtctgaaacggcttgaagagaacatgacccggctcgggctgacagttcggaccgtt
gcctccgatcttcgccagtttgaacccgaagcgccgtttgatgcggttttgctggatgcc
ccgtgcagcgccaccggcacgatccgccgccatccggatgtgccctggatcaagaagcct
tatgacattgagaagctgagcgagatccagaaggagctgctggaccgggtggtggactgg
gtgcgaccgggtggcctgattgtgtattgcacctgttcgcttgaagccgccgagggcgag
gctcaggccgatgcttttatcggccgtctgggcgacaggatcgcaccggttccggtcact
ccggatgaggtcgggggtcttgcacaccttgttacaaataccgggtatctgcgctgcctg
ccctgccatgaagctgataaaacacgagaaaacacaggtctggacggatttttcgccgcc
agattccgccgtctttaa
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