Labrenzia sp. VG12: CHH27_19955
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Entry
CHH27_19955 CDS
T04984
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr03030
DNA replication
labr03410
Base excision repair
labr03420
Nucleotide excision repair
labr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHH27_19955
03410 Base excision repair
CHH27_19955
03420 Nucleotide excision repair
CHH27_19955
03440 Homologous recombination
CHH27_19955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
labr03032
]
CHH27_19955
03400 DNA repair and recombination proteins [BR:
labr03400
]
CHH27_19955
Enzymes [BR:
labr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHH27_19955
DNA replication proteins [BR:
labr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CHH27_19955
DNA repair and recombination proteins [BR:
labr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CHH27_19955
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHH27_19955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_polI_exo1
C1ORF64
Motif
Other DBs
NCBI-ProteinID:
ASP35237
UniProt:
A0A222F821
LinkDB
All DBs
Position
complement(4282793..4285777)
Genome browser
AA seq
994 aa
AA seq
DB search
MIRAMSTQDSSPALTADDHLILVDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWK
LLQEGLTPEEGDEPTHFAVIFDHSAKTFRNDIYPEYKAHRPDPPEDLVPQFGLIREATRA
FSVHCIEQAGFEADDLIATYARQAAEQGARVTIVSGDKDLMQLIGPKVGMIDTMKNKIFG
EPEVFEKFGVGPDKVIEVQSLAGDSVDNVPGVPGIGLKTAALLINEFGDLETLLDQAETI
KQKKRRENLIEFADQARVSKELVTLKQDVPVEVPVGDLSVTEMDGPKAVGFLKAMGFSTL
TKRIAEETGADLAAVEATDFQVPGWDVPDHKGRLMERAPSSTAPASPGGSGEAGDSPDGM
MVPQTVADARAESIRAIPVDSSAYETVTSLERLQEWCDAAFEKGYVAFDTETTSLDAMQA
DLVGLSLSTEPGKACYVPLAHVDGEGDLLGGGGLVEGQLPLKDALDVLKPMLEDRAVLKI
AQNLKYDWLVMTRYGIDISPFDDTMLLSYTVDAGKGGNGMDELSERWLDHKPIPFKEVCG
SGKSMITFDKVAIDKATAYAAEDADVTLRLWLILKPRLASDRMATVYETLERPMVPVLAR
MEKRGISVDRQMLSRLSGDFAQGMAAHESEIYELAGENFNIGSPKQLGDILFGKMGLPGG
KKTKTGAWSTSAQVLEDLAAEGHELPSKIVAWRQLSKLKSTYSDALPGYINPTTGRVHTS
YALAATTTGRLSSSEPNLQNIPVRTEAGRKIRKAFVAEKGHKLISADYSQIELRVLAHMA
DIPQLKKAFDDGLDIHAMTASEMFGTPIEGMDPMVRRRAKAINFGIIYGISAFGLANQLG
IARGEAGDYIKTYFERFPGIKDYMEATKKQVHANGFVTTIFGRKAHYPDVNTKNPNMRAF
YERAAINAPIQGSASDILRRAMVRMEDRLTASKLTAQMLLQVHDELIFEVPDGEVDDTIP
VIRDVMENACDPALKLSVPLQVDARAADNWDEAH
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgccatgtcgacgcaagattcctcccccgccctcactgctgacgaccacctg
atcctggtcgacggttccacctttatcttccgcgcctaccacgcgctgccgccgctgacg
cgcaagccggacgggctgccggtgggggccgtctccggcttctgcaacatgctgtggaag
ctgcttcaggaagggctgaccccggaagagggcgacgagccgacacattttgcggtgatc
ttcgatcattccgccaagaccttccgaaatgacatctaccccgaatacaaggcgcaccgt
ccggacccgcccgaagatctggtgccgcaattcggcctgatccgggaagcgacgcgtgcc
ttttccgtgcattgcatcgaacaggccggctttgaagccgacgacctgatcgcgacctat
gcgcgccaggcggcagagcagggcgcccgcgtcaccatcgtctccggcgacaaggacctg
atgcagctgatcgggcccaaggtcggcatgatcgacacgatgaagaacaagattttcggt
gagcccgaagtctttgaaaaattcggcgtcgggccggacaaggtcattgaggtccagtcg
ctggccggcgacagcgtggacaacgtgcccggcgtgcccggcatcggtctgaagaccgcc
gcgcttctgatcaacgaattcggcgacctggaaacactgctcgatcaggcagagaccatc
aagcagaagaagcgccgggaaaacctgatcgaatttgccgaccaggcccgcgtttccaag
gaactggtgacgctgaaacaggacgtcccggtggaggtcccggtcggcgacctgtctgtc
acggaaatggatggaccgaaagcggtcggttttctgaaggccatgggcttcagcacgctc
accaaacgtattgccgaggagaccggtgctgatctcgccgcggtcgaggcaacggacttc
caggtgcccggctgggatgtgcccgaccacaagggccgcctgatggaacgcgcgccgagc
agcactgcgccggcctccccgggtgggtctggtgaggctggagacagtccggacggcatg
atggtgccgcagacagttgccgatgcccgcgcggagagcatccgggcgatcccggtcgat
tccagcgcctatgaaaccgtaaccagcctcgagcgccttcaggaatggtgcgacgcagcc
ttcgagaagggctatgtcgccttcgacacggaaaccacgtcactcgacgccatgcaggcc
gacctcgttggcctgtcgctctccaccgagcccggcaaggcctgttatgtgccgcttgcc
catgtcgatggagaaggcgacctcctgggcggcggcggtctggtggaaggccagctgcca
ttgaaagacgcgctggatgtgctgaagccgatgctggaggaccgcgcggtcctgaaaatc
gcgcagaacctcaaatatgactggctggtgatgacccgctacggcatcgatatcagcccg
ttcgacgacacgatgctgctgtcctacacggtcgacgctggcaagggcggcaacggcatg
gacgaattgtccgaacgctggctcgaccacaagccgatcccgttcaaggaggtttgcggc
tccggcaagtcgatgatcaccttcgacaaggtggccatcgacaaggccaccgcctatgcc
gccgaggatgccgacgtcaccctgcgcctgtggttgatcctgaagccgcggttggcgagc
gaccggatggcaactgtctatgaaaccctggaacggccgatggtgccggtgctggcgcgc
atggaaaagcgtggcatttccgtcgaccggcagatgctgtcgcggctttccggcgatttc
gcgcagggcatggcggcgcatgaatctgaaatctacgaacttgccggcgaaaacttcaac
atcggctcgccgaagcagctcggcgacattctcttcggcaagatgggccttcctggcggc
aagaaaaccaagaccggtgcctggtcgacctctgcccaggtgctggaagacctcgccgcc
gaaggccatgaactgccgtcgaagatcgttgcctggcgtcagctctccaagctgaagtcg
acctattcggatgcacttcccggctacatcaacccgaccacgggccgggtccatacgtcc
tatgcgctggcagcaaccaccaccgggcgcctgtcgtcatccgaaccgaacctgcagaac
attccggtcaggaccgaagcgggccgaaaaatccgcaaggcctttgttgcagaaaaaggc
cacaagctgatttcggccgactacagccagatcgagttgcgcgtgctcgcccatatggcc
gatataccccagctcaagaaggcctttgacgacgggctcgacattcacgccatgacggcc
agcgaaatgttcggcacgccgatcgagggcatggacccgatggtgcgccgccgcgccaag
gccatcaacttcggcatcatctacggcatatcggcctttggcctggccaaccagctcggc
atcgcacgcggtgaggcaggcgattacatcaagacctatttcgagcgcttcccgggtatc
aaggactacatggaagcgaccaagaaacaggtgcatgcgaacggtttcgtcaccaccatc
ttcggccgcaaggcgcattatccggacgtgaacaccaagaacccgaacatgcgggccttc
tatgagcgcgccgcgatcaacgccccgatccagggctcggcctccgacatcctgcgccgc
gccatggtgcgcatggaggaccggctgacggcgtccaaactcactgcgcaaatgctgttg
caggtgcatgatgaactgattttcgaagtcccggacggcgaagtggatgacaccatcccg
gtgatccgcgacgtcatggaaaatgcctgcgatccggcgctgaaactctccgtcccgctg
caggtcgatgcaagggcggcggacaattgggacgaggcacactag
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