Labrenzia sp. VG12: CHH27_20210
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Entry
CHH27_20210 CDS
T04984
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHH27_20210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_20210
Transporters [BR:
labr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CHH27_20210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_29
SMC_N
RsgA_GTPase
AAA_16
PRK
AAA_23
nSTAND3
TniB
DUF87
Zeta_toxin
KAP_NTPase
AAA_15
MeaB
G-alpha
Motif
Other DBs
NCBI-ProteinID:
ASP35279
LinkDB
All DBs
Position
complement(4341674..4343410)
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AA seq
578 aa
AA seq
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MSVLDIKNLTVEFPGRKSVFVAVNGVDMSVDAGKVLGVVGESGAGKSTVGNAVIGLLQEP
GHIAGGEIFLHGKRIDELPYKEKRLLRGRKIGMIFQDPLTSLDPLQTVESQLVETIRTHL
PLSAKEAQQRAVELIDAVGIPNPAERVKQYPHQFSGGMRQRVVIALALCAEPELVIADEP
TTALDVSIQAQILDLMKNLCAERNVAMLVITHDMGVIADITDHVAVMYHGDLVEFGDTKQ
VLGAPKHPYTQSLISAVPRPDIRVERFPVVNYIEKAGTPQKHIDISTHWLGKARDYEKVT
GPLVQIRDLDMRFETRGSIFPSRRKYFQAVKKVSFDIQEGETFGLVGESGSGKSTIARLI
TGLYHPTGGSILFGKTELTSLKNRRDVLAMRRQMQMIFQDPYSSLNARMRVSDIIAEPIK
FHKLASSNAEVRQIVDDLLDHVGLGAASGKKFPHEFSGGQRQRISIARALATRPRFLICD
EPTSALDVSIQAQILNLLKDLQEELGLTMLFISHDLAVIRQMCNRIGVMRNGELCEVSDC
DQLFEAPQHAYTRELLSLMPSLDLLSTANLDAVEQPGT
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttcttgatatcaaaaacctgaccgtcgagtttccgggtcgaaaatcggtcttt
gtcgccgtcaacggcgtcgacatgagtgtcgacgccggcaaggtgctgggcgttgtcgga
gaatccggggccggcaagtccacggtcggcaatgccgtcatcggtctcctgcaggagccg
ggtcacattgccggcggcgagatcttcctgcacggcaaacgcatcgacgagctgccctac
aaggaaaagcgtctgctgcgcggacgcaagatcggcatgatcttccaggatccgctgacc
agccttgatccgctgcagaccgttgagtcccagctcgtcgagacgatccgcacccacctg
ccgctgtcggccaaggaggcccagcaacgggctgtggaactgatcgatgccgttggcatt
cccaacccggccgaacgcgtcaaacagtatccgcaccagttttccggcggcatgcgccag
cgtgtcgtgattgcgctggcgctctgcgcggaaccggagctggtcatcgccgacgagccg
accaccgcgctcgacgtctcgatccaggcccagatcctggacctcatgaaaaacctgtgc
gccgagcgcaacgtggccatgctggtgatcacccatgacatgggcgtcattgccgacatc
accgaccatgtggccgtgatgtatcacggcgatctggtggagttcggcgacaccaagcag
gtgctcggggcgccgaaacacccttatacgcaaagcctgatttccgccgtgccgcgcccc
gacatccgggtcgaacggtttccggtggtcaactacatcgaaaaagccggcacgccgcaa
aagcatatcgacatctccacgcactggctgggcaaggcacgcgactatgagaaggttacc
ggcccgcttgtccagatccgggacctcgacatgcggtttgagacccgtggctcgatcttc
ccgtccaggcgcaagtatttccaggctgtcaagaaggtcagtttcgacatccaggaaggt
gagacctttggcctcgtgggcgaaagcggatccggcaagtcgaccatcgcgcgcctgatc
accggtctctatcatccgaccggcggctcgatcctgttcggcaagaccgaactgacctcg
ttgaagaaccgccgcgacgttctggccatgcgccgtcagatgcagatgatcttccaggat
ccgtattcctcgctgaatgcgcgcatgcgggtgagcgacatcatcgccgagccgatcaag
ttccacaaactggcctccagcaatgcggaagtccggcagatcgttgacgaccttctcgat
cacgtcggcctcggagcggcatcgggcaagaagttcccgcatgagttttccggcggccaa
cggcagcgcatctcgatcgcgcgggctctggcgacacggccccggttcctgatctgcgac
gaaccgacctccgcgctcgatgtgtcgatccaggcccagatcctgaacctcctgaaggac
cttcaggaggagctcggcctgaccatgctgttcatcagccacgatctcgcagtgatccgg
cagatgtgcaaccgcatcggcgtcatgcgcaatggtgagctttgcgaagtctcagactgc
gaccagctgttcgaggcaccgcaacacgcctatacgcgtgaattgctgtccctgatgccg
tcactggacctgttgtcgaccgccaacctggatgccgtggagcagcctggcacctga
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