Labrenzia sp. VG12: CHH27_20805
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Entry
CHH27_20805 CDS
T04984
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labr03400
]
CHH27_20805
Enzymes [BR:
labr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CHH27_20805
DNA repair and recombination proteins [BR:
labr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CHH27_20805
Prokaryotic type
CHH27_20805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASP35375
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All DBs
Position
complement(4479664..4481220)
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AA seq
518 aa
AA seq
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MQDPLHIVWFKKDLRVQDHAPLKRASLHGPVLPLYVVEPELWQQPDMSGRHFEFLTECLA
SLRQDLTVLGQPLIVRTGRVTEILAELADRFVIGGLWSHEETGNDWTYQRDRAVTAWCRE
RGIAWTECRQTGVIRRLKSRDGWAGQWDSFMAKPGIDAPRLPPLGGLENGAIPTVKDLAL
APDPCPDRQRGGRKAAMETLESFLFRRGKPYRAAMATPVRAFDACSRLSPHLAFGALSMR
EVAQATWARQRELRDQDFQGRTTWQGAMRSFSGRLHWHCHFMQKLEDEPRLEFENLHRAY
DGLRPKDPDKMRLQAWQNGETGLPFVDACMRALKATGWMNFRMRAMLMAVASYHFWLDWR
APGLHLARQFTDYEPGIHWPQVQMQSGTTGINTVRIYNPVKQGLDQDPDGAFVRRWVPEL
KVIDDAHLHEPWKADNAGKVLGKAYPFPIVDHLGAAKEAREKVWAVRKGQAFRGTAADIQ
SKHGSRKSGLPLRGRENRRRRSDKPADPDQADLFGGAS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagaccccttacacatcgtctggttcaagaaagacttgcgggtccaggatcatgca
ccgctgaaacgcgcttctttgcatggcccggttttaccgctctatgtggtcgaaccggag
ctttggcagcagccggacatgtcgggcaggcacttcgagtttctcaccgagtgcctggcc
tccttgcgacaggacctgacggtgcttggccaacccctgatcgtccggaccggccgggtt
acggaaattctggccgagctcgccgaccgttttgtgatcggcggtctgtggtcgcacgag
gaaaccggcaatgactggacctaccagcgagaccgtgccgttaccgcctggtgccgcgag
aggggcattgcctggaccgagtgccgtcagaccggcgtgatccgccggctgaaatccagg
gacggctgggccgggcaatgggacagcttcatggcaaagccaggaatagatgcgccgcgt
ttgcccccacttggcggattggagaatggcgctattccgacggtgaaggatctcgcgctt
gcgcccgatccctgccccgaccggcagcgcggcggccggaaggcagcaatggagacgctt
gagagtttcctgttccggcgtggcaaaccgtatcgggcggcgatggcaacgccggtcagg
gccttcgatgcctgctcacggctgtcgccccatcttgccttcggcgcgttgtccatgcgc
gaggtggcccaggccacctgggcccgccagcgcgaactcagggaccaggactttcagggc
cgaaccacctggcagggggcaatgcgttccttttccggacgtcttcactggcactgccat
ttcatgcagaagctggaggatgaaccaaggctggagtttgaaaacctgcaccgggcctat
gacgggctcagaccgaaagaccctgacaaaatgcggcttcaggcctggcagaacggcgaa
accggccttcccttcgtcgatgcctgcatgcgggcgctcaaggccacgggctggatgaat
ttccggatgcgcgccatgctgatggccgtcgccagctatcatttctggctggactggcgg
gctcccggcctgcatctcgcccggcagttcaccgattatgagccgggcattcactggccg
caggtccagatgcaatcgggcaccacagggatcaacacggtccggatctacaatccggtc
aaacagggccttgatcaggaccctgacggagcgttcgtgcgccgctgggtgccggagctg
aaggtgattgacgacgcgcatctccatgagccctggaaagcggacaatgccggcaaggtg
ctcggcaaggcctatccctttcccatcgtcgaccacctgggtgccgcaaaagaggcccgg
gaaaaggtctgggcagtgcgcaaggggcaagcctttcgcggcacggccgccgacatccag
tcgaaacacggcagccgcaagagcggccttccgttgcgtgggcgggagaaccgccggcgg
cgaagcgacaagccggccgatccggaccaggcagatctcttcggcggtgcttcatga
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