Labrenzia sp. VG12: CHH27_21035
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Entry
CHH27_21035 CDS
T04984
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHH27_21035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_21035
Transporters [BR:
labr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CHH27_21035
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_21
AAA_25
TOBE
nSTAND_NTPase5
Arginosuc_syn_C
Myosin_N
AAA_22
nSTAND3
AAA_29
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
ASP35415
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Position
4523819..4524913
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AA seq
364 aa
AA seq
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MANTRGAAVKYDSVQKSYDGESLVVKNLNLDIPPGEFLTMLGPSGSGKTTCLMMLAGFEP
ATHGEIYLNDRPINNVPPHKRGIGMVFQNYALFPHMTVAENLAFPLQVRNVNKADQQAKV
QRALEMVELGSFGNRRPAQLSGGQQQRVAVARALVFDPELVLMDEPLGALDKQLREQMQY
EIKHIHENLGVTVVYVTHDQTEALTMSDRVAVFNDGVIQQLSTPDDLYEDPQNSFVAQFI
GENNKLSGKVVDIQGEECLVELDDGTKLKADKVNVAAVGDRTTLSLRPERVEFDTHDAMD
NLVDGRIEELIYLGDHIRVRMNVAGNDEFIVKVRNRGEKRKLHVGETVPVGWALNDCKAL
DAVV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacacggggcgctgctgttaagtatgacagcgttcaaaagagctatgacggc
gaaagcctggtcgtaaagaacctcaatctcgatatcccgccgggcgaattcctgaccatg
ttggggccgtccggatccggcaagacaacctgcctgatgatgctggcggggtttgagccc
gccacccacggcgagatctatcttaatgatcgcccgatcaacaatgtgccgccgcacaag
cgtggcatcggcatggtgttccagaactacgccctgttcccgcacatgacggtcgcggag
aacctcgcgtttccgcttcaggtccgcaatgtgaacaaggcggaccagcaggcaaaggtg
cagcgggcactggagatggtcgaactcggcagcttcggcaatcgccgcccggcacagctc
tccggcggccaacagcagcgcgtcgccgttgcccgcgccctcgtgttcgacccggaactc
gttctgatggatgagccgcttggtgcgctcgacaagcagctgcgcgagcagatgcagtat
gaaatcaagcacatccatgaaaatctgggcgtcacggtggtctacgtgacccacgaccag
accgaggctctgaccatgtcggaccgggtggccgtgttcaacgacggcgtcatccagcag
ctgtcgacacccgatgacctctatgaagatccgcagaattccttcgtggcccagtttatc
ggcgagaacaacaagctgagcggcaaggtcgtggacatccagggcgaggagtgcctggtt
gaactcgacgatggcaccaagctgaaggccgacaaggtcaatgtcgccgccgtcggcgac
aggaccaccctgtcgcttcggccggaacgtgtcgaattcgacacccatgatgcgatggac
aatctggtcgatggccggattgaggaactcatctatcttggcgaccacattcgtgtgcgc
atgaatgtggccggcaatgacgagttcatcgtcaaggttcgcaaccgcggagagaagcgc
aagctgcatgtcggtgaaacggtccctgtgggctgggcactgaatgactgcaaagcgctc
gacgctgttgtctga
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