Labrenzia sp. VG12: CHH27_21050
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Entry
CHH27_21050 CDS
T04984
Name
(GenBank) polyamine ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHH27_21050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_21050
Transporters [BR:
labr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CHH27_21050
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Paralog
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Motif
Pfam:
BPD_transp_1
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Motif
Other DBs
NCBI-ProteinID:
ASP35418
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Position
4527450..4528304
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AA seq
284 aa
AA seq
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MSALPPYASPLQRTWFYSFRIICGLIFFFLIFPILVILPLSFNAQDFFTFTKEMLALDPA
GYSFKHYNDFFTNPDWQQALTNSVLIAPVATILATGFGTLAAIGLSQSHVPYKSAIMAVL
ISPMIVPLIISAAGMYFFYSRIGLQGTYWGVVLAHAALGTPFVIITVTATLVGFDRSLVR
AAASLGANPVTTFFKVQMPLIIPGVVSGALFAFITSFDEVVVVLFLGSAGQKTLPWQMFT
GLREQISPTILAVASLMVAISICLLTVLELLRRRSERLRGMTPG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacttcccccatatgcgtcccccttgcagcggacctggttctactccttccgg
atcatttgcggactgatcttcttcttcctgatctttccgatccttgtgatcctgccgctg
agcttcaacgcacaggactttttcaccttcaccaaggaaatgctggcgctggatccggcc
ggctattccttcaagcactacaacgacttcttcaccaatccggattggcagcaggcactg
accaactcggtgctgattgcccccgtggccaccatcctggcaacaggctttggcacgctt
gctgccatcggcctgtcccagtctcacgtgccttacaagtccgcgatcatggcggtcctg
atctcgccgatgatcgtgccgctgatcatctcggccgccggcatgtatttcttctattcg
cgcatcggcctgcagggcacctactggggtgtggtactggcccatgccgcgctcggcacg
cctttcgtgatcatcacggtgacggcgaccctggtcggctttgaccgttcgctggtacgt
gcggcggcaagcctcggcgctaatccggtaacgaccttcttcaaggtgcagatgcctctg
atcattccgggcgtcgtttccggagcattgtttgcctttatcacgtctttcgacgaggtc
gtggtggtgctattcttgggctctgcaggtcagaagaccctgccgtggcagatgttcacc
ggcctgcgcgaacagatttcaccgaccatcttggcggtggcttcgctgatggtggcaatc
tcgatctgcctcctgacggttctggagctgctgcgccgccggtcggaacgcttgagaggt
atgacgccgggctga
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