Labrenzia sp. VG12: CHH27_21275
Help
Entry
CHH27_21275 CDS
T04984
Name
(GenBank) hypothetical protein
KO
K15125
filamentous hemagglutinin
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
labr00536
]
CHH27_21275
Glycosaminoglycan binding proteins [BR:
labr00536
]
Heparan sulfate / Heparin
Microbial pathogens
CHH27_21275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
Tox-HNH-HHH
Motif
Other DBs
NCBI-ProteinID:
ASP35461
UniProt:
A0A222FAL7
LinkDB
All DBs
Position
4583887..4592271
Genome browser
AA seq
2794 aa
AA seq
DB search
MIKSVLNSVFCAVFLVQSSLPAVAGGLTPDVSAPAGNRPTIIDAPNGVPIENIATPNAQG
LSHNKFTDFNVGPDGLVINNSRTVGQSRLGGLIAGNPNLQNSGPATTILNEVTSSNRSLL
EGATEIHGSRADYILANPNGITCNGCGFINIPRATLTTGVPVVDAGRLQGFTVERGTVTI
GADGLAAETTDYFDIVSRAVEINGQIHGGEELGIFAGRNSFNYDDRTVEASAGSASDKPE
FAIDSSALGGMYAGRIKLIGTEDGVGVRAPDQATAATGDFQITADGRLVLGGTLSARQTL
QAQSVNGSIEVGQDASVYGEETLIFRAGDGIAVAENAVLGAAGDVALEAGTIDFDGAELL
AGLNTDGTLAAGVGSLTVSTTGLADFSAATRLRAGAAMALSVGALTQLGTAYADTYSADA
AGDMRLADVSADTSLTLAAGGDLGVATGATLYGASGLTLQVDGSLQTETDAVIASGGDIA
LTAGTIDYQGAKLLAGLSADNSLIAGAGALEIETAGLAQFSEETSLRAGSDLTLQAGSLQ
QLGTAFADVYEVETTGDIVISNVSAGTRAQVRSSGGALAINDDATLYAGSGLTLEAAGAL
TAGTGALVGSGGDLALSAGSIDYDGSDLLAGLQSDGSLAAGTGAIEVTATGLADFSEDTR
LVAGDALTLAAGAIDQSGAAVAGSYAATADSDITLGTVSSDTGLSVTSEGGDVTVGGSSV
LYAAGDMALDAAGTLQTESGAVLGAAGDISLNAGSLDHQADELLAGMRSDGTLLADTGAI
DITVDAAASLSAASRVRAGDALSVTAGSLDQAADIFAGQYTVRTTGDAVLGNASVADSLD
VASSDGAVTVSSGAMLYSGGDLDLSGGTQITVSSGAEVNAGSHIGLGAPVIDLAGDAVLA
GVSGDGAALDGLGTITLSASDRLDISSGTRVQSGDLTRISAGDWRQYGELEVGALALDLD
TLSISGGNALVEAGDISGDISGTATIAASSQGLKAANTLDLSVNDLDIAGTLFVNGNGVL
SVAGALSVTGGLEAAGGLTVRGGTASVADGARVIANGAALFDDMDDLTNRGAIYAGDSLS
VRTSTLDNDGGLLLAANGLTLEGRTAGTKATEIVNHKGGVIEALGGDVVLRAELLQNLTD
VTFTTSTTSFANEMVTGAYPPDWLKGGFDKYWAAGGIGDWGQFWDYGGGPGGYVFAPHPD
KIAEILEDKNASADDWDQNWWKEYAPTRIAEFDPDNGTYDDWLMLAPDEDGAAPSGGTVT
IHVTEDQVEYLDPVARIAASGGNMVLEVGTLQNEASEIVAAGNLTIDGDNLVNTGQTLTR
VITVEQSWSSYESRTLGFAPNHRFLDNGNRHRTLSAETIGAAPGTIHAGGTLSGTLTGTL
TNEAGSPSTPETLQLSNLDSTIVQVNGGATAAFGDNGPSFTTSLDGTSPLTSDADGAPVP
FFDPTTYRFNRQLFGDAPETSPFLFETRFEFIDHGSFYGSQYFLDTVGIADIGSHIRSLG
DPFFESRYIADQVRMATGRRWLTSDTANDAAQMKQLIDNAAVAASDLDLTAGVSLSADQV
ALLTSDIVWYERKVVNGVEVLSPRLYLASTSARNRTGAVIAGRNVSLDAAEIRNVRGTLM
ADETLVAGAGSALLNRSGTIAGRDVTLSGETVTIETATRQTGNGTTATGTWAFERGAVVA
EDSLDILSGQDTRVTGADLSSGGSLSIRTGRDLVVSGLKLDRHFEAKGQAGSNRYETSQS
ETRVSGATIQAGEAIDLEAARDLEVKGGLIASDGTARLNAGESVDIGTLEETAQTFDSRK
KSGFLSASSKTRETSSTTNVGSMVTALGDLEISADNKDVVISGSAVTSQADVTLSAGRDV
RLEAAEDTAEDHRVEKKRGFFAETTSAGFAAGYRSEAHTYDTASVTQVTSAVSGENVTIS
AGRDVVSEAASVAAGSDLRLDAGRDIRLEAVHDLYAHSESHKVDTFALSVSAFENVSGPL
KTLADVPRMATSGRGNLGYQALSAVSAGLKAVDALNQLNAIASGGTVAGVRVGIGVSSER
SSSSESSAIARTATLSAGNNLSLDAGRDITAKGAQIDAGNDISLAAGRDIRLESAENRMA
FEGDSSSASVGLGVTFGVGAGGASLGVGLDVSGQQSSYEHAETFHTNTNVTAGGHVAIAT
GRDLALKGARVEADSATLDVGRNLEIESRLDTAEGSNQSSGYSAGVSVGIGLGPNGAGPS
FGVSGSVNGSQGSSSTAWVDAPSGIVTENGLDVRVGETTSLTGGVLASRSGDMTLETDRL
ETEDLDLHRKGRQLSGSVGVNVGRDPEGKTTPGLTVEGAYSNSETEGVARATIGEGTVIV
HDGDGDGVRAADLEAMADEAEADGDTARAEALREEAELEAAEDNTTTETRLANINRDPDA
VVVVTSQKDEGFEFYVSDTSVREIGKVLSKVGNAIGDLNISPQQREILRRLAACGGRQGQ
NRYNPLNWFVSTAYAADCSQTAIEDLMIGVKRETLAELVEYCENLDPGVEAYAKAALAAR
IFADLPVADRAQLKSISKWDIESVSGLSYDTILMLELANDALHCEAASCKDTKNQTVLKL
YNTIGQEELHVATFLKLTPPTESSLGFDTTGMSWSQYIAVVQAEELIGNATGAVAGTALA
KAISNVASRVGPSVAKRFANSYSAPKGTVDPGSVYQVRFDPSHPGRPAPSFSVDTSAFTS
GSATANGGIRNSRQFWTAWLSMPNNGLSLANQAAVASKRAPIVDDDWLKVFPEHKDFRGQ
QLVHHHMDYGKYAIPVPRGAHNNSPGFAYWHPPR
NT seq
8385 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtcggttctgaacagtgttttctgtgcggtttttctggtccagtcctccctg
cccgcggtcgccggcgggctgacacccgatgtcagtgcacctgccggcaaccggccaacc
atcatcgacgcgccgaacggcgtgcccatcgagaacatcgccacccccaacgcgcagggc
ctctcccacaacaagttcaccgatttcaatgtcgggccggatggccttgtcatcaacaat
tccagaactgtcggccagagccggctgggcggcctgatcgccggcaaccccaatcttcag
aattctggtcccgcgaccacgatcctgaacgaggtgacctcctccaaccgctcgctgctg
gagggcgcgaccgaaattcacggcagccgggccgactacattctcgccaatccgaacggc
atcacctgcaacggctgcggtttcatcaacattccgcgggccaccctgacgaccggtgtg
ccagtggttgatgccggcaggctgcaggggtttaccgtcgagcgcggcacggtcaccatc
ggcgcggacggcctcgccgccgagaccaccgactatttcgacatcgtctcccgcgccgtc
gagatcaacggtcagatccatggcggcgaggaactcggaatattcgccgggcgcaacagc
ttcaactatgacgaccgcaccgtcgaggccagcgccgggtccgccagcgacaagccggag
ttcgccattgattccagtgcgctcggtggcatgtatgccgggcgaatcaagctgatcggc
accgaagacggcgtcggcgtgcgcgcacccgaccaggcgaccgcggccaccggcgatttc
cagatcaccgcggacggccggctggttctgggcggcacgctctccgcccgccagaccctc
caggcgcaatcggtcaatggctccatcgaagtcgggcaggatgcgtccgtctatggcgag
gagaccctgatcttccgggccggcgacgggatcgcggtggcggaaaatgccgttctgggt
gctgccggtgatgtggccctcgaggccggcaccattgactttgacggcgccgaactgctc
gcgggcctcaacacggacggcacgctggctgcaggtgtcggctcgctgaccgtttccacg
acgggccttgccgatttctccgccgcaacccgcctgcgggccggcgccgccatggccttg
tccgtcggcgcgctgacccagctgggcactgcctacgcggacacctattcggccgacgcc
gcgggcgacatgcgccttgccgatgtcagtgccgacaccagcctgacgcttgccgccggc
ggcgacctcggcgtcgcgaccggggcgacgctttacggcgcctccgggctgacgcttcag
gtcgacggcagtcttcagaccgaaacggacgccgtgatcgccagcggtggcgacattgcc
ctgaccgccggcacgatcgactaccagggggcgaaacttctggccggtctgtcggcggac
aacagcctgatcgccggcgccggggcgctcgagatcgaaaccgcgggcctggcgcagttc
tcggaggaaacgagccttcgggctggctcggatctgacgttgcaggcggggtctctccag
cagctcggcacggcctttgccgatgtctacgaggtcgagaccaccggtgacatcgtcatc
tcgaacgtgtctgccggcacgcgcgcacaagtgcgctccagcggcggggctctcgccatc
aatgacgatgcgaccctttacgcgggcagcggcctgacgcttgaggcggcgggcgctctc
accgccggcaccggggccctggtcggcagtggcggcgaccttgcgctgtccgctggctcc
atcgactatgacggttcggacctgctcgccggcctgcagtccgacggcagccttgccgca
ggcaccggcgcgattgaggtcacggcaacgggccttgcggatttttcggaagacacccgc
ctcgtcgccggtgacgccctgacgctcgccgccggcgctatcgaccagtccggcgcggca
gtcgccgggtcctacgcggcgacggctgacagtgacatcacgctcggcaccgtctcctcg
gacaccggtctcagcgtgacctccgaaggcggtgatgtcaccgtcggcggcagctccgtc
ctctacgcggcgggcgacatggcgctggatgcggccggaacgctgcaaaccgagagcggc
gccgtgctgggcgctgccggcgatatcagcctcaacgccgggtcgctggaccaccaggcg
gacgaactcctcgccgggatgcgctccgacggcacgctgctcgccgacaccggcgcgatc
gacatcaccgtggacgcggcggccagcctgtcggcggcaagccgcgtgcgcgcgggcgac
gctctctcggtgaccgccgggtcgctggaccaggccgccgacatttttgccgggcagtac
accgtccgcaccaccggggacgccgtcctcggcaacgcctcggtcgccgacagtctcgat
gtggcctccagcgacggcgcggtcaccgtgtcttccggggccatgctctattccgggggc
gaccttgacctgtcgggcggcacgcaaatcaccgtgtcgtcgggggccgaggtcaatgcc
ggcagccacattggccttggcgcaccggtgatcgatctggcgggggacgcagttctggcc
ggtgtctccggcgacggcgcggccctggacggtctcggcaccatcaccctgagcgcgtcc
gacaggctcgacatttccagcggcacacgggttcaatccggcgacctgacgcggatcagc
gcgggcgactggcgccaatacggcgaactggaagttggcgccctggcgctcgacctcgac
accttgtcgatcagcggcggcaacgccctggtcgaggccggcgacatatccggcgacatc
tcgggcacggccaccatcgcggcctcctcgcaggggttgaaagccgccaacacgctcgat
ctctccgtcaatgacctcgacattgccggcaccctgttcgtgaacggcaacggtgtgctg
agcgtcgccggggcgctgagcgtgaccggcggcctggaggcagccggggggctgaccgtg
cgcggcggcacggccagcgtcgccgacggcgcccgggtgatcgccaacggggcggcgctc
ttcgacgacatggacgacctgaccaaccggggcgccatctatgccggcgacagcctgagc
gtgcgcacgtcaaccctcgacaatgacggcggcctgctgctggccgccaacggcctgacg
ctggaaggccgcacggccgggaccaaggccacggaaatcgtcaaccacaagggcggcgtg
atcgaggcgctcggcggcgatgtcgtcctccgggcggagctactccagaacctcaccgat
gtcaccttcaccacgtcgaccacctctttcgccaacgaaatggtcaccggcgcctacccg
cccgactggctgaaaggcggcttcgacaagtactgggctgccggcgggatcggcgactgg
ggccagttctgggactatggcggcggcccgggcggatatgtctttgccccgcatccggac
aagatcgccgagatcctggaagacaagaacgcctccgccgacgactgggaccagaactgg
tggaaggaatacgcgccgacccggatcgccgaattcgacccggacaacggcacctatgac
gactggctgatgctggcacccgacgaggacggggcggcgccgtccggcggcaccgtgacg
atccacgtgaccgaagaccaggtggaatatctcgacccggtcgcccgcatcgcggcctcc
ggtggcaacatggtcctggaggtcggcacgctgcagaacgaggccagcgagatcgtcgcc
gccggcaacctgaccatcgacggcgacaatctggtcaacaccggccagacgctgacccgt
gtcatcaccgtcgagcagagctggagttcctacgagagccgcacgctcggcttcgcgccc
aatcaccgctttctcgacaacggcaaccgccaccggaccctctccgccgagacgatcggc
gccgcgccgggcacgatccatgccggcggcacgctctcgggcacgctgaccggaacgctc
accaacgaggccggctcgccgtccacgcccgaaaccctgcagctgtcgaacctggacagc
accatcgtgcaggtcaacggcggcgccaccgcggcctttggcgacaacggaccgtccttc
acgaccagcctggacggcacctctccgctgacctccgatgccgacggcgccccggtgccg
ttcttcgacccgaccacctaccgcttcaacaggcagctgttcggcgacgccccggaaacg
agcccgttcctgtttgaaacccgcttcgagttcatcgatcacggctccttctacggctcg
cagtatttcctcgacacggtcggcattgccgacatcggcagccacattcgttcgctcggc
gatcccttctttgaaagccgctacatcgccgaccaggtgcgcatggcaacggggcgccgc
tggctgacttcggacacggccaatgacgcggcccagatgaaacagctgatcgacaatgcc
gccgtggcggcgtccgatctcgacctgaccgccggcgtttccttgagcgcggaccaggtg
gctctgctgaccagcgacatcgtctggtacgagcgcaaggtcgtgaacggggtcgaggtc
ctgtcgccccgcctttacctggcctccacgtcggcgcgcaaccggaccggcgcggtcatc
gccgggcgcaacgtctcgctcgatgccgccgaaatcaggaacgtgcgcggcacgctcatg
gcggacgagaccctggtcgccggggccggcagcgcgctgctgaaccgctccggcaccatc
gccgggcgcgacgtgaccctgtccggggaaacggtgaccatcgagaccgcgacccggcag
accggcaacggcaccaccgccaccggcacctgggcctttgagcgcggcgcggtggttgcc
gaggacagcctcgacatcctcagcggtcaggacacgcgcgtgaccggtgccgacctgtcc
agcggcggcagcctgtccatcaggaccggccgcgaccttgtggtctcggggctgaagctg
gaccggcatttcgaggcgaagggccaggccggcagcaacaggtacgaaaccagccagagc
gagacccgtgtctccggtgcgaccatccaggccggcgaagcgatcgatctcgaggcggcg
cgcgatcttgaggtcaagggcgggctgatcgccagcgatggcaccgcccggctgaacgcc
ggcgagagcgtcgacatcggcaccctggaggaaacggcgcagacgttcgattccaggaag
aagagcgggttcctgtcggccagttccaagacgcgggaaacgtcctccaccaccaatgtc
gggtccatggtgaccgcgctgggagacctggagatctcggcggacaacaaggacgtcgtc
atcagcggatcggccgtcacctcgcaggccgacgtgacgctgtccgcgggccgggacgtg
cgcctggaagcggccgaggacacggcggaggatcaccgtgtcgagaagaagcgcggcttc
tttgccgaaaccacaagcgcgggctttgccgcggggtaccgttcggaagcccacacctac
gacaccgccagcgtgacccaggtgacgtcggccgtctccggcgagaacgtgaccatctcc
gccggccgcgacgtggtgtccgaggccgcctcggtggctgccggcagcgatctgcgcctg
gatgctggccgcgatatccggctggaggccgtgcacgatctctacgcccattcggaaagc
cacaaggtcgacaccttcgcactctccgtcagcgccttcgagaacgtctccggtccgctc
aagaccctcgccgacgtgccgcgcatggccacctcgggccggggcaatctcggctaccag
gcgctgtccgcggtttccgcggggctgaaggccgtcgacgcgctcaaccagctgaatgcc
atcgccagcggcggcacggtggcgggcgtgcgtgtcggcatcggcgtgtccagcgagagg
agcagttcgtcggagtcaagcgccatcgcccgcaccgcgacgctctccgccggcaacaat
ctcagcctggatgccggccgtgacatcaccgcgaagggcgcccagatcgatgccggcaac
gacatctcgctggcggccggccgggacattcgcctggaatcggcggaaaaccggatggcc
ttcgagggcgacagctccagcgcctcggtcggtctcggggtgacgttcggggtgggcgcc
ggcggggcgtccctcggggtcgggctcgacgtgtccggacagcagagttcctatgaacat
gccgagaccttccacaccaacaccaatgtcaccgccggcggccatgtcgccattgccacc
ggccgcgatcttgccctgaagggggcgcgggtcgaggcggacagcgccacgctggatgtc
ggccgcaacctggaaatagagagccgtctcgacaccgccgagggctccaaccagagcagc
ggctacagcgcgggggtctccgtgggcatcggactgggtccgaacggcgccggcccgtcc
tttggtgtctccggcagtgtcaacggctctcaaggctccagcagcaccgcctgggtggac
gcgccttccggcattgtcaccgagaacgggctggacgtcagggtcggcgagaccacgtcc
ctcaccggcggcgtcctggcctcgcgctccggcgacatgacgctcgaaaccgaccgcctg
gagacggaagatctcgacctgcaccgcaaggggcgccagctctccggctcggtcggcgtc
aatgtcggccgggacccggaaggcaagaccaccccgggcctcaccgtggaaggcgcctat
tccaactccgagaccgagggcgtcgcccgggccacgatcggcgagggcacggtcatcgtc
catgacggcgacggcgacggcgtcagggccgccgacctggaggccatggccgacgaggcc
gaggccgacggcgacaccgcccgcgccgaagccctgcgggaagaagcagagctggaggcc
gcggaagacaacaccacaacggaaacccggctcgccaacataaatcgcgatccggacgcg
gtcgtggtcgtcacgtcgcagaaggacgagggctttgagttttacgtcagcgatacgtcg
gtgcgagaaattgggaaggttctctcaaaagttggcaatgccattggagacctgaatatt
tcgccacagcaacgtgaaattctgaggcgtttggcggcctgtggaggtaggcaaggccaa
aatcgatacaacccgctcaactggtttgtctctacggcatacgctgctgactgctctcag
accgcgattgaagatctcatgatcggcgttaagcgggagaccctggctgaacttgtagag
tactgcgaaaaccttgatccgggtgttgaagcctacgcgaaggctgcattggcggcgcgc
atttttgcagacttgccggttgccgatcgcgcgcaactgaaatcgatatcaaaatgggac
atcgaaagtgtctcagggctgtcctatgacacgatcttgatgctcgagcttgcaaatgac
gcattgcactgcgaggcagcaagctgcaaggacaccaaaaaccagacggtcctcaagctc
tacaacaccattggccaggaagagttgcatgttgcaacattcctgaagttgacaccgccg
acagaaagctcgctgggctttgataccacgggcatgtcctggtctcagtacattgcggtt
gtccaggccgaggaactgatcggaaatgcgacaggggcggtagcaggaacagcgcttgca
aaggccatttcaaatgttgcttccagagtaggtccttcggttgcaaagaggtttgcaaac
tcctattccgctcccaaaggtacggtcgatcctggatcagtttaccaagttcgatttgat
ccttctcacccaggccggccggcgccgtcgttttcggtcgatacgtcggcgttcactagc
gggtcagcgacagcaaacggtggcattcgaaacagtcgccagttctggaccgcttggttg
agtatgccgaacaatggcttgagtcttgcgaaccaggccgcagttgccagcaagagagcg
cctattgttgacgatgactggttaaaggtattccctgaacataaggactttcggggccag
caactcgtgcaccatcacatggattacgggaaatacgctattcctgttccacgtggggca
cacaacaattcgcctgggttcgcgtattggcaccctccaaggtaa
DBGET
integrated database retrieval system