Labrenzia sp. VG12: CHH27_21355
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Entry
CHH27_21355 CDS
T04984
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labr03400
]
CHH27_21355
Enzymes [BR:
labr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CHH27_21355
DNA repair and recombination proteins [BR:
labr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CHH27_21355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ASP35475
UniProt:
A0A222F8L3
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Position
4609192..4610748
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AA seq
518 aa
AA seq
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MTEKTTCRNLVLVLGDQLTPGLSSLVRSDPERDRVLMVEVMDEASYVRHHRKKIAFLFSA
MRHFAEDLREAGWTVDYVTLDAAGNSGSFRGEVARAVKRLGPARVVVTEPGEWRVLDDMK
DWARALRVPVDILTDTRFLCDPASFRAWASGRKQLRMEYFYREMRRRTGLLMEGDKPAGG
KWNFDTDNRKPAKPDLFLPSPKRFAPDRITQEVLDLVGRSFPDNIGTLEPFWFAVTRSEA
EEAFAHFLETALAGFGTYQDAMLRGEKFLFHSVLSAYLNAGLLDPLDLCRKVEAAYREGR
APLNAAEGFIRQILGWREYVRGIYWLKMPGYVMENALGATAPLPAFYWTGETDMLCLSEA
VGQTIDEAYAHHIQRLMITGNFALLAGVDPAEVHEWYLAVYADAYEWVELPNTLGMSQFA
DGGLLGSKPYMSSGNYINKMSDYCGACSYDVRQRTGDKACPFNALYWDFLDRNADVLSSN
PRLAQPYSSWKRMDTEKQGAMRRHAGEIRRKLAANERV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaaaacgacgtgccgcaatcttgttctggtccttggggaccagttgacgcct
gggctttccagtcttgtcaggtcggaccctgaacgtgaccgggttctgatggtcgaggtg
atggacgaggccagctatgtgcgccatcacaggaagaagatcgccttcctgttctccgcc
atgcgtcacttcgccgaagatctgcgcgaggcaggctggacggttgattatgtgaccctt
gatgcagctggcaattcgggcagcttccggggcgaggttgcacgcgcggtgaaacggctg
ggccccgcacgggtcgtcgtcaccgagcccggtgaatggcgtgttctggacgacatgaaa
gactgggcgcgggcgctgcgggtgccggtcgatattctcaccgacacgcggttcctgtgc
gaccctgcaagctttcgcgcctgggcctcgggtcgcaagcagttgcgcatggaatatttc
taccgcgagatgcgccgcaggacgggcctgctcatggagggggacaagccggcaggtggc
aagtggaacttcgacaccgacaatcgcaagccggccaaaccggatctcttcctgcccagc
ccgaaacggtttgcacccgaccggatcacgcaagaggtgctggacctggtcggcaggtcc
tttcccgacaatatcggcacgctggagccgttctggtttgccgtcacccggtcagaggcc
gaggaggccttcgctcattttctggaaaccgccctcgccggtttcggcacttatcaggat
gcaatgctgcgcggcgagaaattcctctttcattcggttctgtcggcctatctcaacgcc
ggcctgctcgacccgctggatttgtgccggaaggtggaagcggcctatcgcgaggggcgc
gcgccgctgaatgcggcggaggggttcatccggcagatccttggttggcgcgaatatgtg
cggggcatctattggctgaagatgccaggctatgtcatggaaaacgcgcttggcgcaaca
gcgccgctaccggcattctactggaccggcgagaccgacatgttgtgcctttccgaggcg
gtcggccagaccatcgacgaggcctatgcccatcacatccagcgcctgatgatcacgggc
aactttgcgctgctggcaggggttgatccggccgaagtgcatgaatggtacctggctgtc
tatgccgatgcctatgaatgggtcgagttgccgaacacgctgggcatgagccagtttgcc
gatggcggcctcctggggtccaagccctatatgtcgagcggcaactacatcaacaagatg
tccgactactgcggtgcctgcagctacgacgtccggcaacggactggcgacaaggcctgt
cccttcaatgcactctattgggattttctggaccgcaacgcagacgtgctttcttcaaac
ccgcgattggcgcagccatattccagctggaagcgaatggacacggagaaacagggggcg
atgcggcgacacgcaggggaaatccggcgcaagcttgccgcaaacgaaagggtctag
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