Labrenzia sp. VG12: CHH27_21390
Help
Entry
CHH27_21390 CDS
T04984
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
labr03000
]
CHH27_21390
Transcription factors [BR:
labr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CHH27_21390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_11
TetR_C_13_2
Sigma70_r4_2
TetR_C_6
TetR_C_17
TetR_C_45
LexA_DNA_bind
TetR_C_26
TetR_C_25
Terminase_5
TetR_C_43
TetR_C_29
TetR_C_41
Motif
Other DBs
NCBI-ProteinID:
ASP35480
LinkDB
All DBs
Position
complement(4619354..4619926)
Genome browser
AA seq
190 aa
AA seq
DB search
MGNEKASEILLVARRVMMERGYNGFSFRDIAAEVGIKSASIHYHYPTKGDLAEAAAKDYR
EWCLTALADLSAPDAPGLLAAYGNLFVAMLKDKGSVCLGGVLASDAATLPPSINAEVEKF
FLGHHEWLSAVLQTGQQNGEIRPDLDPIAFAKTFVSSMEGAMMVSRATGNPNHLSETIDQ
LIHLARPLSR
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgaaaaagcatctgagatactgctcgttgcccgcagagttatgatggagcgg
ggctataacgggtttagcttccgcgacattgccgccgaagtaggcattaagagcgcgagt
attcattaccactatccaaccaagggagatttagccgaggccgctgcaaaggattaccga
gagtggtgcttaacggctttggcggatttgtcggcaccagacgcgcctgggctcctcgca
gcctacggcaacctgtttgttgccatgctcaaagacaagggaagcgtctgtctgggcggt
gtcctcgcatcggatgccgcaacgctcccaccgtcgatcaatgccgaagtcgaaaagttc
tttctggggcatcatgaatggctaagtgcggttctccaaacaggacagcaaaacggcgag
attagacccgaccttgacccaattgcattcgcgaagacgtttgtgtccagcatggaagga
gccatgatggtctcgcgcgccactggtaacccaaaccatttatctgagacaattgatcaa
ctcatccatttggcgcgaccgttgtcgcgatag
DBGET
integrated database retrieval system
