Labrenzia sp. VG12: CHH27_23070
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Entry
CHH27_23070 CDS
T04984
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHH27_23070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Cadherin_5
AgI_II_C2
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
ASP35766
UniProt:
A0A222FAV7
LinkDB
All DBs
Position
complement(4983917..4991722)
Genome browser
AA seq
2601 aa
AA seq
DB search
MSDQTDKGKPRASDKDVLPEEAKDTKRTQSEEGFGWSIEAEGADSNPASPQAEPGGASQD
RDPHPFPGTTSIPDHGLQETSAPPQGPLSPPDQEAPSASHGLAGATEPGPAPVADIPANA
ATPPDVEPFSSASPAGAATRAPAGTHTPPPSAAGSAPSPDSGNTPPPPTGLAPAPVGGHA
PSNPTGVTPTPGAGHTPPTSTGGPSTPGGTKTPPTSTIGTPTPGGGHTPPATTAARISGL
DTDTAREDHHVVGGKLSAGGMLTVSDPDAGEDKFQAVTGAPGSAGYGSFTVAENGRWTYS
ADNSQAVIQALRPGSSLVDRATVHSADGTAHELRVVITGTNDTPVLSASTASATEDGSSV
TGQMSATDVDAGDTKAFSIGQPVDGFTMHADGSWTFDPSHAAYQHLAAGQTQQVTIPVTV
TDSAGATDTENLVITVTGTNDAPVVNGPVDLGSGTEDKAVPISTAQLLAHATDIDTGDQL
SVSSLAASHGTITGDAAHGFTFTPDPNYNGSVMLSYQVTDGHGGHVPQTASLTLGATPDA
AVISGVDTGSITEDRNVGSSSAHPLAVSGSLSVHDPDGTAWDHFQYNRFGEHAISDPFGG
SLHIDRSGNWGYEVDNTHPAIQALAAGQEGHAVYEVHSADGTAHQIRITIHGTNDAPVLS
AATASATEDGQSVKGQMSATDVDTGDTRSFSLAQSVDGFSMNADGSWSFDPSHAAYQHLA
AGQTQQVTIPVTVTDSAGATDTENLVITVTGTGDTAVIGGVDTGSVAEWTAGQNMSPDYA
QPGMSTLSKATLGASGHLSITDPDAGEASFDTHGLGFTYHGTYGDLLLRANGEWFYHADA
GSNRFVGGAATTRGTTIDRLGEGQSLTDTITVYSKDGTAHDIVITIHGSNDRPYCSSEVQ
LADGTEDVAQTLTLKQLLANTVDVDANDAGKLSITGLKVDHGSVRDNQDGTFTFTPEKDY
NGQVHFTYGVKDAHGGLTHTGATTTLAAVDDAAVITGTGDTLKEDRNLQGAGSGAEVHAT
GRFHVIDPDGAVQSHFVPHDIGGLLTGSFGGTLQIDENGGYFYSLFNTQVDHLKDGESVQ
DRFTIQSVDGTTHEVVFTIQGTSDAPVLYRNYQFAFEGTQLVQGQISAGDADKGDAQHLS
YATSGTVAGFSLHSDGSYTFDPANAAYDHLGRGDVQRLHIPITVTDPDGLTTNGELEIKL
EGTNDAPRVSGAVDLGATREDTAITFSKVALLANATDVDDHDHLHVTGVAVDAHYGTITD
NGDGTYTFTPATNYSGTDLPLTFTVQDRAGATTTGTATLDVTAVNDPAMIGGGDTGNVTE
DKGVKGGNLTTSGTLTISDPDAGEAAFQPLTGGAGAGTYGTLTLDAQGHWTYTADNSQSA
IQGLKTGESLTDTITVTAVDGTTHNVVISIAGTDDAAVISGQTVGDITEDAHSLNSVWET
VSGKLTVVDPDGGQSSFTSVSKISDPFATIGNGLWISSDGHWDYQVTDRGQLQHLAEGEA
VDVIYEVATADGTKQRITITVHGTNDAPTASFGGYAPIIDSSGPLSTDEDKAISVPVSSL
LTWFSDTDTRDVLGVENLRADHGKVTMSPDGQSFVFTPEANYNGKVFFDFAVVDHHGGRT
PGGVTMPVRAVADAAVIGGVDTGSVTEDVAPGPHTILNTISTSGNLTISDPDAGESVFVA
QGAVKGAYGTFSVNAAGHWTYDANNNQSAIQGLSQNAAPLTETFTVTSRDGTQHDVTISI
HGTNDAPVLSASTASATEDGQSVTGQMSATDVDQGDTQHFSIGNPVAGFQMDAHGAWSFD
PTDAAYQHLASGQTQQVTIPVTVTDSAGATDTQNLVITVTGTDDATVFGGVQTGDAHEDG
NDVHVGGHHYLHDATDWQQITVTDPDGPVSQLTVEHGGQSVIWDMRSSLDIPTPYGKFQL
VAADGSGFLSKGYYWNYIGDNNNPAVQALKAGETLPPEQLTLVSPDGVRFPLTVTVHGAE
DGIRIDTRGTLDHVSEHGPTTPVSVGGQLQAHDPDAHDSVSWQPTPTGGVAGRMGTFTVD
ASGHWEYHVDPAKAAMLGQGKQMFEHLTITATSTDGSQASQRILVEVRGTDQAPDLSAST
ASATEDGHSISGHMSATDVDMADQKHFTAPSIAGFTLNGDGSWSFDPTDAAYQHLADGAT
QLVTIPVTVTDKAGLSDTENLVITVTGTNDAAHITGPDSATVVEDRNLSGGFLTAGGTLQ
VTDTDSGQDSFAPVAGQQGTGGYGSFSIDTQGHWSYTADNSQHAIQQLGHGQSLTDTCVV
TSSDGTRHTLMVTIDGTDEAPVVKPSVTAVHGMGTQHLAGTLASGGLGGWAINNGHGGSV
QSLHGQYGTLTINPQTGHFEYHYQQNSGVIKHGGSSAASGQHVDTFHITQQGTAAGDVDV
QVQVSVQSVHGNSGHHVDHTVLQGITFTPAPTVQHDAPDETWTDEVTVTLTADGGVVLHD
QSRDLPEPQPVAADPEQADGRTSDSEMAGPGETENGPANSGRDHLAAYFDAIGHDPDAAG
PSSKQAEHLTVYLEASGVDPDQTGPSQDPPDPAVLALDDPHEVTGNNAQDTPEDDPDGGQ
IADVPDPVVQDPNDDTSHFGS
NT seq
7806 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaaacagacaagggcaagccgcgcgcttcagacaaggacgtgcttcccgaa
gaggccaaggatacgaagaggacgcagtccgaggagggctttggctggtccatcgaagca
gagggggccgacagtaatccggcatcgccgcaagcagaaccgggcggcgcttcacaggat
cgcgacccgcaccctttccctggaacgacttccattccggaccacggtctgcaggaaacc
agtgcaccaccgcagggtcctctttctccgccggaccaggaagcgccatctgcctcacat
ggtctggccggagcaactgaacccggccctgcaccggttgccgacattccagcaaacgca
gccacgccccccgacgtcgagccgttctcctcggccagccctgcgggggcggcaacgcgt
gccccggcggggacgcacacaccaccgccctccgcggcaggctcggcgccatcgccggac
agtggcaacacgcctccgccgccaacagggctcgcaccagcaccagttggcggtcacgcc
ccctcaaacccgaccggtgtcacaccaacgccgggcgctggccatacgcctccaacctca
acagggggaccgtcgacgccgggcggaacaaaaacacccccaacctcgaccattggcaca
ccgacaccgggcggcggccacacgccgccagcaacaacggcagcccggatttccggtctc
gacacggataccgcgcgcgaagaccatcatgtggtcggcggcaaactctcggccggcggg
atgctgacagtttcggatcccgacgccggcgaggacaagttccaggccgtcaccggagct
cccggctctgccggatatggcagcttcacggtggccgaaaacggccggtggacctattcc
gccgacaacagccaggccgtcattcaggctctgagaccgggaagcagcctggtcgacaga
gccacggtacatagcgcggacggaacggctcacgaactgcgtgttgtcatcaccggtacc
aatgacacgccggtcctcagcgcttccacggcctcggccaccgaagacggcagttcagtt
acaggccagatgtcggcaacggatgtggatgcaggggacacgaaggccttctccatcggt
caaccggtcgacggcttcacgatgcatgccgatggctcgtggaccttcgatccttcccac
gcggcctatcagcatctggctgctggccagacacagcaggttaccatcccggtgacggtc
accgacagcgccggggcgacggacactgaaaacctcgtcatcacggtgaccggcaccaat
gatgcccctgtcgtaaacggaccggtggatcttggcagcggcacggaggacaaggccgtc
ccgatctcgacagcgcagcttctggcccatgccaccgacatcgataccggcgaccagctg
tcggtaagcagtctcgctgcgtctcacgggaccattaccggagatgcggcccacggcttc
accttcacgccggacccgaactacaacggttcggtcatgctgagttaccaggtcacagac
ggtcatggcggacatgtgccccagaccgcttccctgacgctcggagcgacaccagatgcc
gccgtgatcagcggtgtcgacactggatcgattaccgaggaccggaatgtcggttcgtca
tcggcgcatccgctcgcggtcagcgggagcttgtccgtgcatgatccagacggtacggcc
tgggatcatttccagtacaaccgcttcggcgaacatgcgatctcggatcccttcggcggc
agtctgcacatcgatcggagtggcaactggggttacgaggtcgacaacacccatcccgcc
atccaggcgcttgcggccggacaggagggacatgcggtctacgaggtgcattcagcggac
ggtacggcgcaccagatccggatcacgatccatggcacaaatgacgcgccggtcctgagc
gcggcaaccgcttcggccaccgaggatggtcagagcgtcaagggacagatgtcggcaaca
gatgtcgacaccggcgacacgaggtccttctcgcttgcgcaatcagtcgacggcttttcc
atgaacgcggacggctcctggtccttcgatccttcccacgcggcctatcagcatctggcg
gccggtcagacgcaacaagtcaccatcccggtgacggtcaccgacagcgctggagcgacc
gacaccgaaaacctcgtcataactgtaacagggactggcgatacggctgtaattggcggt
gtggacaccggcagtgttgccgagtggactgcgggtcagaacatgtcgccggattatgcc
cagccgggtatgtcgaccctaagtaaagcgacactgggcgcgagtgggcacctctccatc
accgacccggatgccggagaggcttcgttcgatactcacggccttgggttcacctatcat
ggcacctacggcgacctcctgcttcgagcgaatggcgaatggttctatcacgcagatgcc
ggatccaaccggttcgtcggcggtgctgcaacgacgcgcgggacgaccattgaccgtctg
ggggaaggccagagcctgacggacacgatcaccgtctattcgaaggacggtacggcccat
gacatcgtgatcacgatccatggcagcaacgaccggccctattgttcttccgaggttcag
ctggccgacggcacggaagacgtcgcccagaccctgaccttgaagcaactgctcgccaac
acggtggatgtggatgccaatgatgcgggcaagctgtcaatcaccgggctcaaggtcgat
cacggctctgtccgggacaaccaggacggcaccttcacgttcacaccggaaaaggactac
aacggtcaggttcacttcacctatggcgtgaaggatgcccatggcggtctgacccacacc
ggggcaaccacgacgcttgcggcggtcgatgatgctgcggtgatcacgggcaccggcgat
actcttaaagaggacaggaatctgcagggagcgggaagtggtgcggaggttcatgccacc
gggcgcttccatgtgatcgatccagatggtgccgtgcagtcacactttgttccacacgat
atcggtggactgttgaccgggtcctttggcgggaccctccagatcgacgagaatggcggt
tacttctacagtctttttaacacgcaggtcgaccacctgaaggacggcgagtcggtccag
gatcgcttcacgatccaaagcgtcgatggcaccacgcatgaggtggtgtttaccatccag
ggaacaagcgacgctccggtcttgtaccggaactaccaatttgcatttgaggggacccaa
ctggtccagggccagatctcggcgggcgacgccgacaagggcgacgcacagcatctttcc
tatgcgacttcgggaaccgtcgcagggttttcgttgcactctgatggcagctatacgttc
gatcctgccaacgccgcctacgaccatcttggaagaggtgacgtccagaggctccatatc
cccatcacggtcacagaccccgacgggttgacgaccaatggcgaacttgaaatcaaactg
gaaggaacaaatgacgcgccgagagtgtccggcgctgtagatcttggcgcaacgcgtgag
gacactgcgatcacgttctcaaaggtcgcgctgctcgcgaacgcgacagatgtcgacgat
cacgaccacctgcacgtcaccggcgtcgccgtggacgcgcactacggaacgatcaccgac
aacggcgacggcacctacacgttcacgcccgcgacgaactactccggcaccgatttgcca
ctgacatttaccgtgcaggatcgcgccggcgcaaccactaccggcaccgccacgcttgat
gtcaccgctgtcaacgacccggcaatgatcggcgggggcgataccggcaacgtcacagaa
gacaagggcgtaaaaggcggcaacctgaccacaagcggcaccctcaccatctcagatcca
gacgcgggagaagcggcttttcagccactgaccggcggagccggcgcgggtacctacggc
accctcacgctggatgcccaaggccactggacttacaccgccgacaacagccagtccgcc
atacagggtttgaaaaccggcgagtccctgaccgatacgatcaccgtgaccgcggtggac
gggacaacccacaatgttgtcatcagtattgccggcacggatgatgcggcagtcatctca
ggacaaaccgtcggagacatcacagaagatgcgcattcgctgaactccgtctgggaaacc
gtgagcgggaagctgacggtggtcgacccagatggcggtcaatccagcttcacctccgtg
agcaagatatctgatccatttgcgacgatcggaaacggcctttggatatccagtgacggc
cactgggattatcaggtcaccgatcgcggacagctacagcatctcgctgagggcgaggct
gtcgacgtgatctatgaagtcgcgacggcggatggaaccaaacaacggatcacaatcacc
gttcacggcaccaatgatgcgccaacagcatcattcggtgggtatgcccccatcatagac
agttccggccccctcagcaccgatgaagacaaggcgatcagcgtgccggtgagcagcctt
cttacctggttcagcgatacggacacacgagacgtacttggggtggaaaacctgcgggcc
gaccatggcaaggtcacgatgtcaccggacggccagagttttgttttcactccggaagcg
aactataatggtaaagtcttctttgattttgcggtggtggatcaccacggaggaagaacg
ccaggcggcgtaaccatgccagttcgcgctgtcgcggatgcagcggtgatcggcggggtc
gataccggcagtgtgacagaggacgtcgcgcctggcccccacaccatactcaacacaatc
tccacgtccggtaacctcaccatctcggatccggatgcgggtgaaagtgtttttgttgcg
cagggcgcggtcaagggcgcctacgggaccttcagtgtgaatgccgcgggccattggaca
tatgacgccaacaacaaccagtctgcgatccaggggctgagccagaatgcagcaccgctg
accgaaacctttaccgtgacctcacgggacggcacgcagcacgatgtaacaatctcgatc
catggcaccaacgatgcaccggtcctgagtgcctcaaccgcatctgcaaccgaagacggt
cagagcgtcacgggacagatgtcggcaacggatgtcgaccagggcgacacgcaacacttc
tcgatcggcaatcccgtggcagggtttcagatggacgcccacggagcctggtcattcgac
ccgaccgatgccgcttatcagcacctggccagcgggcagacgcagcaggtcaccattccg
gtcacagtcacagacagtgccggggcaacggacacccaaaatctcgtcatcaccgtgacc
gggacggacgatgcgaccgtcttcggcggtgttcaaaccggagacgcccatgaagacggc
aacgacgttcatgttggagggcaccattatcttcatgacgcaacggactggcagcagatc
acggtcacagatccggatggtccggtcagccagctgaccgttgaacatggcggccaatcg
gtgatctgggacatgcgttcgagtctcgacatcccgaccccttacggcaaatttcaactc
gtcgccgcggatggctctggctttctatcgaaaggctattactggaactacatcggagac
aacaacaatccggcggttcaggctctgaaggccggagagacacttccacctgagcagctc
acactcgtatccccggatggcgttcgcttcccgctgaccgtgacagtgcacggagccgag
gacggtatccgcatcgatacgcgcggcacgctcgaccatgtgtcggaacacggaccaacg
actccggtcagcgtcggcggacagcttcaggcccatgatccggatgcacacgacagcgtt
tcctggcagcccacaccgaccggtggggtcgccgggcgcatggggacgttcacggtggat
gcgtccgggcattgggaataccacgtcgaccctgcgaaggcggcaatgcttggccagggc
aagcagatgttcgagcatctcaccatcacggcaacctcaacagacgggtctcaggcgtcg
cagcgcatattggtggaggttcgcggaaccgatcaagccccagacctgtctgcctccaca
gcatctgcaaccgaagacggtcacagcatcagcggacacatgtctgcaacggatgtcgac
atggccgaccagaaacacttcacggcgccgtcgatagcagggtttacattaaacggtgac
ggttcctggagcttcgatccaactgacgcagcctatcagcatctggctgacggcgctaca
cagctggtcacgatccccgtgaccgtcacggataaagccgggctctctgataccgaaaac
ctcgtcatcacggtgaccgggaccaacgatgccgctcacatcacgggtcctgatagcgcc
accgtggtcgaggaccgcaatctctccggagggttcctgaccgcaggtggaaccttgcag
gtgacggacaccgacagcggccaggacagtttcgcacctgttgccggccaacaagggact
ggcggctacggcagcttctcgatcgatacacaaggtcactggagctacaccgccgacaac
agccagcacgccatccagcagcttggtcatggccaaagtctgaccgacacctgcgtggtg
acctcatcagacggcacccggcatacgcttatggtcactatcgatggaaccgacgaagcg
ccggttgtaaagccgagtgtgacggcggtgcatggtatgggaacacagcatcttgcaggc
acacttgccagtggtggcctcggcggttgggcgatcaacaatggtcacggcggttcggtg
cagtcccttcacggacaatacggcacgctgacaatcaatccgcaaaccgggcatttcgag
tatcactaccagcagaactcgggcgtgataaaacacggcgggagttcggccgcctccgga
caacatgtcgataccttccacatcacgcagcaaggaacggcggcgggtgatgtcgacgtg
caagtgcaggtcagcgttcagagcgtacacggaaacagcggccaccatgtcgatcacacg
gttttgcagggcattaccttcaccccggccccaacagtccagcatgacgcccccgacgaa
acatggacggacgaggtcaccgtcaccttgacggccgatggcggtgttgtgctgcacgac
cagagccgggacttgccggagccccagcccgtcgcggccgatcccgaacaagcggacgga
aggacctccgacagcgaaatggcaggaccgggagaaacagaaaacggtccagccaattca
ggtcgcgaccaccttgccgcctatttcgatgcgattggccatgaccctgacgctgccggg
ccctcttctaaacaggctgagcacctgacggtttatctggaggcaagcggcgtggatccg
gatcagaccgggccttcgcaagacccgcccgatccggcagtgctcgcacttgacgatccg
catgaggtcacggggaacaacgctcaggatacgcccgaggatgatccggatggcggacag
attgcagatgtgccggatcctgttgtgcaggatcccaatgatgacacatctcatttcgga
tcctga
DBGET
integrated database retrieval system