Labrenzia sp. VG12: CHH27_23205
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Entry
CHH27_23205 CDS
T04984
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00630
Glyoxylate and dicarboxylate metabolism
labr00680
Methane metabolism
labr01100
Metabolic pathways
labr01120
Microbial metabolism in diverse environments
labr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CHH27_23205
09102 Energy metabolism
00680 Methane metabolism
CHH27_23205
Enzymes [BR:
labr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
CHH27_23205
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer2
Fer4_8
Fer4
Fer4_6
Fer4_21
Fer4_16
Fer4_9
Fer4_4
Fer4_10
Fer4_2
Fer4_17
Fer4_Nqo3
Fer4_15
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
ASP35789
UniProt:
A0A222FAL8
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Position
5016675..5019443
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AA seq
922 aa
AA seq
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MSQITFSLDGKNVTAEDGETIWQVAKREGVAIPHLCHKDAPGYRSDGNCRACMVDIEGER
VLAASCIRAPSEGMVVKTATERAEKAREMVFELLAADQPSRDHHPDPESDFWKWSDAIGV
TSSRYAPCEKPAQDISHPAIAVNLDACIACNLCERACREVQVNDVIGMADRGAHTVPVFD
LADPMGLSTCVACGECVSACPTGALMEKSLLDATATKREVFAEETVDSVCPFCGVGCLTS
VSAKDGKIVSVEGRNGPANENRLCVKGRFGFDYVSSPQRLTKPLIRRDDAPKGRDISMTL
ENHLDYFREATWDEALDRAASGLKASFEAKGGAGIAGFGSAKGSNEEAYLFQKLIRQGFQ
TNNVDHCTRLCHASSVAALMEGIGSGAVTAPFNAAEDADCMIVIGARPAQNHPVAATYIK
QAAKKGTKLIVMDPRGQDLMRYAEYGLKFKPGTDVAMLNAILNVIITEELYDSQYIAAHV
DGFEALKEKIQDFTPEAMEPVCGIDAQTLRDVARLYATSARSIIFWGMGVSQHVHGTDNV
RCLIAMALTTGQIGRPGTGLHPLRGQNNVQGASDAGLIPMVFPDYRSVENPDIRSEYEDA
WGRTLDPVRGLTVVEIMDDILAGGIEAMFIQGENPAMSDPDQNHARKALASLKHLVVQDI
FLTETAWHADVILPASAHAEKLGTFTNTNRQVQIGRPCVPMPGEARADWEILIELANRLG
LGWSYDGVPAIYEEMRSHMASLQNISWERLERDGTVTYPADAPDEPGNEILFGQSFPTAD
GRGKIVPTELVPPNEVPDEDYPMVLTTGRMLEHWHTGAMTRRAEVLNAIEPEPVVSMNPR
DIKLQGLEIGQQVTVETRRGAITLTLRADRDVSTGMMFIPFCFFEAPANFLTNPQLDPFG
KIPEFKFCAARVGAAQQREAAE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcaccttctctcttgatggcaagaacgtcaccgccgaggacggcgaaacc
atctggcaggtggccaaacgcgaaggcgtcgccattccgcacctttgccacaaggacgcg
cccggttaccgctccgacggcaattgccgtgcctgcatggtcgatattgaaggtgagcgt
gtgctcgccgcctcctgtatccgcgcaccgtccgaaggcatggtcgtcaagaccgcgacc
gaacgcgccgaaaaggctcgtgagatggtcttcgaactgctggccgccgaccagccgtcc
cgcgaccatcacccggatccggaaagtgacttctggaaatggtccgatgcgatcggggtg
acctccagccgctatgcaccgtgcgaaaagccggcacaggacatttcgcacccggcaatc
gctgtcaatctcgatgcctgtatcgcctgtaacctgtgcgaacgcgcctgccgtgaagtt
caggtcaatgacgtcatcggcatggccgaccgcggcgcgcacacggtaccggtcttcgat
ctggccgacccgatgggtctgtccacctgcgttgcctgcggtgaatgtgtttctgcctgt
ccgaccggcgcgctcatggaaaagagccttcttgatgcgacggccacgaagcgggaagtc
tttgccgaagaaaccgtcgacagcgtctgcccgttctgcggcgtcggctgcctgacgtcc
gtttccgcgaaggacggcaagattgtcagcgtcgaggggcgcaatggcccggccaacgag
aaccggctctgcgtcaagggccgcttcggctttgattatgtctccagcccgcagcgcctg
accaaacctctgatccgccgggacgatgccccgaaaggccgtgatatctccatgaccctg
gagaaccatctcgactatttccgcgaggcgacctgggacgaagcgctggacagggcggca
agcggcctgaaggcctcgttcgaggccaagggcggcgcgggcatagccggcttcgggtct
gccaagggctccaacgaagaggcttatcttttccagaagctgatccgccagggcttccag
accaacaatgtcgatcactgcacacgtctgtgccatgcctcgtccgtggcagcgctcatg
gaaggcatcggctccggtgcggtgaccgcgccgttcaacgccgccgaggatgccgattgc
atgatcgtcatcggtgcacgtccggcacagaaccatccggtcgccgccacctatatcaag
caggcggccaagaagggcaccaagctgatcgtgatggacccgcgcggtcaggatctgatg
cgctacgcggaatacggcctgaaattcaagccgggcaccgatgtcgccatgctgaacgcg
atcctcaacgtgatcatcaccgaggagctctatgacagccagtatatcgcggcccatgtc
gacggcttcgaagcgctgaaggagaagatccaggacttcacgccggaagccatggaaccg
gtctgcggtatcgacgctcagacccttcgggacgttgcccgcctttacgccaccagcgcc
cggtcgatcatcttctggggcatgggcgtttcccagcatgtgcacggcacggacaatgtc
cgctgcctgattgccatggcactgaccaccggccagatcggccggccgggcacgggtctg
catccgctgcgcgggcagaacaacgttcagggggcgtcggacgccggcctgatcccgatg
gtcttcccggactatcgctccgtggaaaaccctgacatccgctccgaatatgaagatgcc
tggggtcgcacgctcgacccggtgcggggcctgaccgtcgttgagatcatggacgacatt
ctggcaggtggcattgaggcgatgttcatccagggtgagaacccggccatgtccgacccg
gaccagaaccatgcccgcaaggcgctggcgagcctgaagcacctggtggtgcaggacatt
ttcctgaccgaaacggcctggcacgcggatgtcatcctgccggcctctgcccatgcggaa
aagcttggcaccttcaccaataccaaccgccaggtccagatcggccggccgtgtgtgcca
atgccgggcgaggcccgcgccgattgggaaatcctgatcgagctggccaaccggctgggg
ctaggctggtcctatgacggcgttccggcaatctacgaggaaatgcgctcgcacatggct
tcgctccagaatatctcctgggagcggctggaacgcgatggcacggtcacctatccggcc
gacgcgccggacgagccgggcaacgagatcctgttcggccagtccttcccgacggccgat
ggccgcggcaagatcgtgcccaccgaactggtgccgccgaacgaggtgccggacgaggat
tacccgatggtgctgaccaccggccgcatgctggaacactggcacacaggcgcaatgacc
cggcgtgccgaggtgctcaatgccatcgagccggaaccggttgtctccatgaacccgcgc
gacatcaagctccagggtctggagatcggtcagcaggtcacggtcgaaacccgccgcggc
gcgatcaccctgaccctgcgcgccgaccgggacgtttcgaccggcatgatgttcatcccg
ttctgcttcttcgaagcgccggcgaacttcctgaccaacccgcaacttgacccgttcggc
aagattccggaattcaagttctgcgcggcgcgggtcggcgctgcgcagcagcgggaagcg
gccgagtaa
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