Labrenzia sp. VG12: CHH27_24140
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Entry
CHH27_24140 CDS
T04984
Symbol
deoA
Name
(GenBank) thymidine phosphorylase
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00240
Pyrimidine metabolism
labr01100
Metabolic pathways
labr01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CHH27_24140 (deoA)
Enzymes [BR:
labr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
CHH27_24140 (deoA)
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_3
Glycos_trans_3N
PYNP_C
Motif
Other DBs
NCBI-ProteinID:
ASP35956
UniProt:
A0A222FBG1
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Position
5229469..5230785
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AA seq
438 aa
AA seq
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MLPQEIIRKKRDGGTLDAEEIAFFVKGLADGSVTEGQVSALAMAVFFKGLTVDERVALTL
AMRDSGDVMDWSGIDAPILDKHSTGGVGDNVSLMLAPALAACGAAVPMISGRGLGHTGGT
LDKFDSIPGYQTQPDNLLFKKVVKEIGCAVIGQTGNLAPADKRFYAIRDVTGTVESIDLI
TASILSKKLAAGLQGLVLDVKWGTGAFMGSLDEARALAESLVLVANGAGLKTTALLTDMN
EPLASAAGNAVEMQNAVDFLKGTAIDNRLWDVTVAQGGELLASGGIAATADAGMDMMREA
FQSGKAAEKFAQMVHALGGPADFMEKCELYLAKAPVQAPVYAEQDGVVTGVDARAVGVAV
VALGGGRRAAADVIDPSVGLTDLAGVGNTVDADAPLAIVHAKTEAEAEEAAIALRKAYTV
GAAADVQDRPSVVDRIAP
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgcaggaaatcatcagaaaaaaacgcgacgggggcacactcgacgcggaggaa
atcgctttcttcgtgaaaggtctggcagacgggtctgttacggaaggccaggtctcagcg
cttgccatggcggtcttcttcaagggcttgaccgttgacgaacgggtcgccttgacgctg
gccatgcgcgacagcggcgatgtcatggactggtccggcatcgacgcaccgattctcgac
aaacactccaccggtggtgtcggtgacaacgtctcgctgatgctggccccggcgctggca
gcctgcggcgcagcggtgccgatgatttccgggcgcggccttggccataccggcggcacg
ctggacaagttcgacagcattccgggttaccagacccagccagacaatcttctgttcaag
aaggtggtcaaggaaatcggctgcgccgtcatcggccagaccggcaacctggcccctgcc
gacaagcgtttttatgccatccgggatgtgaccgggaccgttgaaagcatcgatctcatc
accgcctcgatcctgtccaagaaactggctgccggccttcaggggctggtgctcgatgtc
aaatggggcacgggcgccttcatggggtctctcgatgaggcacgggcgcttgcggagagt
ctggtgctggtcgcaaatggcgcgggcctgaaaaccacggcgctgctcaccgacatgaac
gagccgctggcgtcggccgccggcaatgctgttgagatgcagaatgcggtcgatttcctg
aagggcacggccattgacaaccggctctgggatgtcactgtcgcgcaaggcggtgaactg
cttgcctccggcggtatcgcggcaaccgcggacgccggtatggacatgatgcgcgaagcc
ttccagagcggcaaggcagcagaaaagttcgcccagatggtccatgccctcggcggcccg
gccgacttcatggagaaatgcgagctctacctagcaaaagcacctgtgcaggcacctgtc
tatgccgagcaggatggtgtcgtgacgggcgtcgatgcaagagctgtcggtgtcgcggtt
gtggcccttgggggcggtcgccgtgctgcggcggatgtgatcgacccctcggtcggcctc
accgatctggcaggtgtcggcaacacggtcgacgcggatgcaccacttgccatcgtgcat
gcaaaaaccgaggccgaggcggaagaagccgcgattgcgctgcgcaaggcctatacggtc
ggagcagctgccgacgttcaggaccggccgagcgtggtcgaccggatcgcgccgtaa
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