Labrenzia sp. VG12: CHH27_24280
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Entry
CHH27_24280 CDS
T04984
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr02010
ABC transporters
labr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHH27_24280
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CHH27_24280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_24280
Transporters [BR:
labr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CHH27_24280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Asparaginase_C
Motif
Other DBs
NCBI-ProteinID:
ASP35980
LinkDB
All DBs
Position
complement(5258393..5259334)
Genome browser
AA seq
313 aa
AA seq
DB search
MKKLITTAIMVSALALSGVAAQAGEIAVIVKTTNSNFWQNVNKGASAAIEGADGHTMTFN
GPASESAVADQVSLVENAVNRGVKGIVLAPSDPEALVPAVKKAYEAQIPVVIIDSGLAEN
GKDYFQAFLSTDNCAAGELVADKMISEVGTKGKVAVMSYVAGVGSEIGRVGCFVKRINDK
SSIEIVGPYYSQSQMATALNQTTDVLAANDDLVGIFGANEPTAIGMARAIVQAGKAGSVT
ALGFDGNKDLQDFVSDGTLAGTAVQGSFQMGELGVQAILQLLNGEEVPSFIDTGVVLATK
DNIDDPAVQNVLY
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctgattacgaccgcaattatggtaagcgcgcttgcgctgtccggtgtggcg
gctcaggcaggtgaaattgccgtcatcgtgaagacgaccaactcgaacttctggcagaac
gtcaacaagggcgcgtcagctgcaatcgagggcgctgacggccataccatgacctttaac
ggcccggcttctgaatccgccgtcgccgatcaggtcagtctcgttgaaaacgcggtcaac
cgcggcgtcaagggaatcgtgcttgccccatccgacccggaagccctggttccagccgtc
aagaaggcctatgaggcccagatccccgtcgtcatcatcgacagcggtctggctgaaaac
ggcaaggactacttccaggccttcctctcgaccgacaattgtgccgccggcgaactggtc
gccgacaagatgatttcggaagtcggcaccaaaggcaaagtcgccgtcatgtcctatgtc
gccggggtcggttcggaaatcggtcgcgtcggctgtttcgtcaagcgcatcaacgacaag
tccagcatcgagatcgttggcccctactactcccagtctcagatggcgacggccctgaac
cagacgaccgacgtccttgctgcaaatgatgatcttgtcggcattttcggtgcaaatgag
cccacagccatcggcatggcgcgcgccatcgtgcaggcgggcaaggccggcagcgttacg
gcgctcggctttgacggcaacaaggatcttcaggatttcgtcagcgacggaacgcttgcc
gggactgccgttcaaggctcgttccagatgggcgaacttggggtccaggcaatcctgcag
ctcttgaacggcgaggaagttccgagcttcatcgacacgggtgtcgtcctggccaccaag
gacaatatcgacgatccggccgttcaaaacgttctctactga
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