Labrenzia sp. VG12: CHH27_24375
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Entry
CHH27_24375 CDS
T04984
Name
(GenBank) mechanosensitive ion channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_24375
Transporters [BR:
labr02000
]
Other transporters
Pores ion channels [TC:
1
]
CHH27_24375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ASP35997
UniProt:
A0A222FA99
LinkDB
All DBs
Position
complement(5277139..5279382)
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AA seq
747 aa
AA seq
DB search
MTGAWKTRLIPCAYTLFLSILLIIPLTALAQDSTTQLPPELQPEAMEQLVSDLDPEQVKA
LTDLMTLLQQGAAAKGENGIAVVEGPGFLEQAQEAASRFGAMVGGHFLNLPALFTGLFAS
IGALFSGSVAGPVHILIGSIALILAAGFAAEFAVNRFFAAKRDRIQSRQPESLFETVKLV
STRAGLDLGGLVVFAIVAVIVGRLAVFDPVTRSFALQAVFWIVFLPRLVAALLRFALAPH
RRELRLVTADDATAKSLYRSFTTLFAVVGVAFFLRNVMQSAGTDAGGTFRFFIGFAVNAW
IIAVIWKARHGLTNIILGDDEDPTSGLERMAQFWPYFSMIFIAFNWLLVQVTASMGIEAL
TAGRSLGVIALVVFAPFLDTMVRGIVSHIVPPMQGEGPVAEAAHMQTRHSYVRIARVALL
AFLVLMVGRIYGLNLLAIGGDDGSAVARNTVVFLLILAAGYLAWEVTNLWVSHQLAKDSP
PTESQDDDAEMGGAGKSRLATILPLIRVVLQITILVLTALLALSQLGVNITPLLAGAGVV
GLAVGFGAQTLVRDVVSGVFFLMDDAFRLGEFIDTGGTQGTIEKISIRSLQLRGTKGAVH
IVPYGEIPKLTNLSRDWVIMKLQFTVPFDTDVEKVRKLFKKIGQEIMEMEEFQDDILAPF
KGQGVTGVDDVGILVRGKFTTKPGKQFGVRKEIYKRVQKAFEENGIQFARKEVRVNIPDN
VTLDDKQKEAVAGAAAAAVSEPKPAGA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtgcctggaagaccagactaattccctgtgcatacactctttttctaagcatc
ttgctgattatccccctgaccgctctggctcaggactccaccacccagctgccgccggaa
ttgcaaccggaagctatggaacagctggtctccgatctcgatccggagcaggtcaaggcc
ctgacggacctgatgacgctgctgcaacaaggggctgcggcaaagggtgaaaacggcatt
gccgttgtcgaaggaccgggatttctggaacaggcacaggaggccgccagcagatttggc
gccatggtcggcggccattttctcaatttgcctgcgctcttcaccggattgtttgccagc
atcggcgctcttttttccggcagtgtggccggccccgtccatatcctgatcgggtccatc
gcgctgatcctggccgccggttttgccgccgaatttgccgtcaaccggttcttcgcggca
aagcgggacagaattcagtccaggcagccggaaagcctgtttgagaccgtcaaactggtc
tccacacgcgccggactggacctcggcggcctggtcgtgtttgccattgtggcggtcatt
gtcggccgtctggccgtcttcgatccggtgacaaggtccttcgcgctgcaggctgttttc
tggatcgtgttcctgccgcggctggtggctgccctgctgcgctttgccctggctccgcat
cggcgtgaattgcggcttgtcaccgcggacgatgccacggcgaaatccctctaccggagt
ttcacaacgctctttgccgttgtcggtgttgcctttttcctgcgcaacgtgatgcaaagc
gccggcacggatgccggcggcacgttccgcttcttcatcggctttgccgtcaatgcctgg
atcatcgccgtgatctggaaggcccgtcacggcctgaccaacatcatcctgggtgatgac
gaagacccgacctcaggccttgaacgcatggcgcagttctggccctatttctcgatgatc
ttcatcgccttcaactggctgctcgtgcaggtgaccgccagcatgggcatcgaggccctg
acggccggacggtcgctgggtgtcattgcgctggtggtgttcgcaccgtttctggacacg
atggtgcgcggcattgtttcccacatcgtgccgcccatgcagggcgaagggcccgttgcc
gaagccgctcacatgcagacccggcacagctatgtccgtatcgcccgcgttgccctgctc
gctttcctggtgttgatggtcggccgcatctacggcctcaaccttctggccatcggcggc
gatgacggctcggcggttgcccgcaacaccgtcgtgttcctgctgatcctggctgctggc
tacctcgcctgggaagtcaccaacctgtgggtgtcgcaccagcttgccaaggattcaccg
ccaacggaatcccaggatgatgatgcggaaatgggcggcgccggcaagtcgcgccttgcc
accatcctgccgctgatccgggtagtcctgcagatcaccattcttgtcctgaccgcactg
ctggcgctcagccagctcggcgtcaacatcacgccgcttctggccggtgccggcgttgtc
ggccttgctgtcggcttcggcgcccagacgctggtgcgcgatgttgtctccggcgtcttc
ttcctgatggacgatgccttccggctcggcgagttcatcgacacgggcggaacacagggc
acgatcgaaaagatctcgatccgttcactgcagctgcgcggcaccaagggcgcggtgcat
atcgtgccctatggcgagatccccaagctcaccaacctgtcccgtgactgggtgatcatg
aagctgcagttcaccgttcccttcgacaccgatgtcgagaaggtgcgcaagctcttcaag
aagatcggtcaggagatcatggagatggaggagttccaggacgacattcttgcgccgttc
aagggtcagggcgtaacgggcgtcgacgatgtcggcatcctggtgcgcggcaagttcacc
accaagcccggcaagcagttcggcgtgcgcaaggagatctacaagcgcgtgcagaaggcc
tttgaggaaaacggcatccagtttgcccgcaaggaggtgcgcgtcaacattccggacaac
gtcactctcgacgacaagcagaaggaagcggtcgccggtgccgccgccgcggccgtgtcg
gagcccaaaccggccggagcgtaa
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