Labrenzia sp. VG12: CHH27_24385
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Entry
CHH27_24385 CDS
T04984
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00300
Lysine biosynthesis
labr01100
Metabolic pathways
labr01120
Microbial metabolism in diverse environments
labr01230
Biosynthesis of amino acids
Module
labr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CHH27_24385
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
labr01002
]
CHH27_24385
Enzymes [BR:
labr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CHH27_24385
Peptidases and inhibitors [BR:
labr01002
]
Metallo peptidases
Family M20
CHH27_24385
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ASP35999
UniProt:
A0A222FB77
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All DBs
Position
5280129..5281301
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AA seq
390 aa
AA seq
DB search
MTASAVSITQDLIRCPSVTPAEGGALQTLETLLGKAGFDVSRVTFQDTDTPDVENLFASI
GSGAPHFVFAGHTDVVPAGAEADWRHGPFQAEIEDGMLYGRGAVDMKGGVAAFAAAALDF
VSDKGTGFGGTISFLITGDEEGPAVNGTVKLLDWAEKQGHTFDACIVGEPTNPDALGDAI
KVGRRGSLSGTVTVEGVQGHAAYPHLADNPIPGLVRLLAALDALKLDDGNERFQPSNLEV
VSVDVGNPAFNVIPARCEARFNIRYNDEWTLDSLKNKVTETLKAVDLGALTLGLEFKRDA
SESFLTKDETLIRALSAAVAEETGRVPELSTGGGTSDARFIKNYCPVVEFGLVGQTMHKV
DECVAVADLDRLKAIYRRFLDSYFSGANGI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttccgccgtttcgattacccaggacctgatccgctgcccgtcggtgacgccg
gcagaaggcggcgcgcttcaaacgcttgagacgctgctgggcaaggcaggctttgacgtg
tcgcgggtgaccttccaggacaccgatacgccggacgttgaaaacctgttcgcctccatt
ggttccggagcgccgcattttgtcttcgccggacacaccgatgtggttccggccggtgcc
gaagccgactggcgacacggaccgttccaggccgaaatcgaggacggcatgctctacggc
cggggcgcggtcgacatgaagggcggtgttgccgccttcgccgcggcggcgcttgacttc
gtcagtgacaagggcaccggctttggcggcaccatttccttcctgatcaccggtgacgag
gaaggcccggccgtcaacggcacggtcaagctgctggactgggccgagaagcagggtcac
acctttgatgcctgtatcgtcggcgaaccgaccaacccggacgcactgggcgatgcgatc
aaggtcggccgcagaggctcgctttcgggaacggttacggtcgaaggcgtccagggccat
gcggcctatccgcatctggccgacaatccgatcccggggctggtgcgcctgctggcggcg
ctggacgcgctgaagctggatgacggcaacgagcggttccagccctccaacctggaagtg
gtttccgttgatgtcggcaatccggccttcaatgtcattcccgcgcgctgcgaagcccgg
ttcaacatccgctacaatgacgagtggacgctggacagcctgaagaacaaggttacagag
acgctgaaggcggttgatctgggcgcgctcacgcttggtctggagttcaagcgcgatgcc
agcgaatccttccttaccaaggacgagacgctgatcagggcgctgtcggccgccgttgcc
gaggagacaggccgcgtgccggaactctcgaccggtggcggtacctccgatgcgcgcttc
atcaagaattattgccctgtcgtggagttcggcctggtcggtcagaccatgcacaaggta
gacgaatgtgtcgcggttgccgatctggaccgactcaaggcaatctacagacggttcctg
gacagctatttttctggagcgaacggcatttga
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