Labrenzia sp. VG12: CHH27_24615
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Entry
CHH27_24615 CDS
T04984
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr02010
ABC transporters
labr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHH27_24615
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CHH27_24615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_24615
Transporters [BR:
labr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CHH27_24615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ASP36039
UniProt:
A0A222FBB8
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All DBs
Position
complement(5328901..5329830)
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AA seq
309 aa
AA seq
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MYIRTITTLLYLCCTCLSAQAACIAVIPAGAEHMFWMETIRGATTAAREDGYETYVRSPN
TERNEEGQVVIVTSALEQGCEGVMVAPNSIDLMERLPDAVRRDAPIVYFDRVMGGAPPAS
IIKTDNFKAGEIAGRALVKRLNGKGRVALLRMHAEVTSTTERETGFLNALSGTGVDVIRD
LYIGSTVQEAREASTKFFLGRPEVDALFTPNESTTIGTLLTLKHMGLAGKYHHIGFDFAP
LLMNALEAGEISGLVIQDPYQMGYSGAKTLIRVIKGEQVPKLVDIPAYYVDLENLRQPEI
QEIVDVDYE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtacattcgcactattactactcttctctacctctgctgcacttgtctctcggcacag
gcggcctgcattgcggtgatcccggccggtgcagagcacatgttctggatggaaacgatc
cgtggggccaccacggcagcgcgtgaagacggctatgaaacctatgttcgttcgccaaac
acggagcggaacgaagaagggcaggttgtgatcgtcacctctgcgctggagcagggatgc
gagggcgtgatggtggccccgaattccatagatctgatggaacggcttccggatgcggtt
cggcgtgacgcgccgatcgtctattttgaccgcgtcatgggaggagcgccgccagccagc
atcatcaagacagacaatttcaaagccggtgagattgccggtcgtgcactcgtcaagcgg
ttgaatggcaagggccgtgtcgccttgctccggatgcatgcagaagtcacttcgaccacg
gaacgcgagaccggtttcctgaacgccctgtcaggaaccggcgtcgacgtgatcagggac
ctctacatcggctcgacggtacaggaagcgcgcgaagcctcgaccaagttctttcttggt
cggcccgaagtcgacgcgctgttcacgccgaacgagtcgaccaccattggcacattgctg
acgctcaaacatatgggtctagccggcaagtaccatcacatcggattcgatttcgcaccc
cttttgatgaacgcgctggaagccggcgaaatctctggcctggtgatccaggatccctac
cagatgggctattccggagcgaagaccctgatccgtgtgatcaaaggcgaacaggtcccc
aaactggtcgacattcccgcctattacgtcgacctggagaaccttcgtcagcctgagatc
caggagattgtggacgtcgattacgagtga
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