Labrenzia sp. VG12: CHH27_24730
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Entry
CHH27_24730 CDS
T04984
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHH27_24730 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_24730 (choW)
Transporters [BR:
labr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
CHH27_24730 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
NDUF_B12
Motif
Other DBs
NCBI-ProteinID:
ASP36061
UniProt:
A0A222FCC4
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Position
5355282..5356124
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AA seq
280 aa
AA seq
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MDWLTDNKLPIGPWARSLVDWLTDNAYWVFDGISYFLETLIDGILWLLQTPHPLFVVVVA
VAIGYAVHRTIAFAAFVAVSLLLIINQGYWEETTETLALVIAASVVCMAVGVPVGVVGAH
NPRFYAAIRPVLDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPAPIRLTQLGVSS
TPTALIEAGQAFGATKRQLLWKIELPYALPQIMAGLTQTIMLSLSMVVIAALVGADGLGV
PTLRALNTVNIAQGFEVGVCIVLIAIVLDRFFRAQEGGKR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttggactggctgacagacaacaagctgccgatcggcccatgggcaaggtccctcgtcgat
tggctcaccgacaatgcctattgggtgtttgacggtatttcatatttcctggaaaccctc
atcgacgggatcctgtggctgctgcaaacgccgcatccgcttttcgtcgtggttgtggcc
gtcgccatcggctatgcggtccaccgcacgatcgcctttgccgcgttcgtcgccgtctcg
ctgcttctgatcatcaatcagggctattgggaagagacgacggaaacgctggcactggtg
attgccgcttcggtcgtctgcatggccgtcggcgtgcccgttggtgtggttggcgcgcac
aacccgcgtttttatgccgcgatccgtcccgtgctcgatctgatgcagacgatcccgacc
ttcgtgtacctgattccggcgctgatcctgttcggtctcggcatggtgccaggtctgatc
gcaaccgtgatcttcgccattccggcaccgatccggctgacgcagctcggcgtctcctcg
acaccgacggcgttgatcgaagcggggcaggcctttggcgccaccaagcggcagctgctc
tggaagatcgaactgccttatgcgctgccgcagatcatggcgggtctgacccagaccatc
atgctgtcgctgtccatggtggtgatcgcggctctcgttggcgccgatggtctcggcgtg
ccgacgctcagagccctgaacaccgtgaacattgcacaaggcttcgaggttggcgtctgt
atcgtcctgatcgccatcgtgcttgaccggttcttccgggcccaggaaggaggcaagcga
tga
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