Labrenzia sp. VG12: CHH27_25680
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Entry
CHH27_25680 CDS
T04984
Name
(GenBank) sensor domain-containing phosphodiesterase
Organism
labr
Labrenzia sp. VG12
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_4
PAS
7TMR-DISMED2
7TMR-DISM_7TM
PAS_9
Rcd1
Motif
Other DBs
NCBI-ProteinID:
ASP37120
UniProt:
A0A222FEE6
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All DBs
Position
5568947..5571862
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AA seq
971 aa
AA seq
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MSFLRPDTARNVLANIVIAMSFMVVTLAAALPARALEPIPVPIDIEALDITNSVEFHRDA
GTRLQVSTAPGADGIVRRIEVPSRDGANTNWVVFALANTSDNQIDRLIVAPNYKLAGSDL
FWPDLGSSRIAAITPSQGIAPERQKSLEADVFLVTLDPGSIVTFVAELTTPNLPEIRIWE
PDVYEETVNAYTLYRGIILGISGLLALFLTILFVVKGTVMFPATAALAWSVLAYLCIDFG
FWGMVFNLEGGGSQLARACAEVMLAASLIIFLYAYLNLNRWNIHYSHLALTTLILILGLL
GVAVWDPSVASGIARLSLAVIGLLGFVTIAVLAFQHYDRAILLIPTWCLLIAWLVGAAMT
ITGYLSNDIVQPALGGGLVLIVLLIGFTVMQHAFAGGAIAQGLISDIERKALALTGAGDI
IWDWDIDRDRIYTGNEVEDLLNLKRGTLEGPARDWLDILHPQDRDRFRATLDAVIDQRRG
KVMQTFRLRSEDGHFRWFRLRARPIIGSDGEVIRCVGTLLDVTEERTAEERLLHDAVHDN
LTGLPNRELFVDRLRTSVVRAKAEETAKPTILVLNLDRFKQVNDSIGLSAGDSILLTVAR
RLGRLIGQQDTLGRLSGDQYGLVLLSEQEPDRIVALADALRKAVRAPITFGDREIFLTCS
VGIAFYEGGKQGVEDMLTNAEIALNHAKRLGGDRQEVFRPILRPLDKNIVDLEADLREAI
KKETLGVFFQPIIRLEDQAVAGFEVLARWNHPKRGKISPSEFIPVAEQSGLINELGMYML
DKGAQQLAFWQREFPLPRPLFASVNLSSRQLLKQDLINDVKAVLSRTSVVPGTLKLELTE
SLVMSNPEYSAKVLERLRGLGAGLSLDDFGTGHSSLSYLQRFPFDTIKIDQSFVKPNSSS
ARPVLLRTMVAMGHDLGMSVVAEGAESENDALELYQLGCEYAQGFFFGEAMSANEATRLL
RKMPAEAAETA
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttctgagaccggatactgcccgcaacgtgctggccaacatcgttattgccatg
tcgtttatggtggtgacgctggccgcggcactgcccgccagggcacttgaaccgatcccc
gtgccgatcgatatcgaggcgctcgatatcaccaattccgttgagtttcaccgggatgcc
ggcacgcgtcttcaggtctccacagcccccggtgcggatggcatcgtccgccgcatcgag
gtgccctcgcgcgatggcgccaataccaactgggtggtctttgcgctggccaacaccagc
gacaaccagatcgaccgcctgatcgttgcccccaattacaagctggccggctcggatctg
ttctggccagacctcggctcttcccgcatcgcggcaatcacgcccagccagggcatcgcg
cccgaacggcaaaagagcctggaagccgacgtcttcctggtgacgctcgatccgggatcg
attgtgactttcgtggccgagctgacgacacccaatctgccggaaatccggatctgggaa
ccggatgtctacgaggaaacggtcaacgcctatacgctttaccggggcatcatcctgggc
atctccggcctcttggcgctgttcctgaccatcctgttcgtggtcaagggaacggtgatg
tttcccgcgaccgcagctcttgcctggtcggtcctggcctatctgtgcatcgatttcggc
ttctggggcatggtcttcaatctggaaggcggcggcagtcagctggcaagggcctgcgcc
gaggtcatgctggcggcgagcttgatcatcttcctctatgcctatctgaacctcaatcgc
tggaacatccactattcccatctggcgctgaccacgctgatcctgatcctgggtcttctc
ggggtcgctgtctgggatccgtcggttgcctccggcattgcccgtttgtcgcttgccgtc
atcgggctgctcggtttcgtcaccatcgccgtcctggccttccagcactatgaccgcgcg
atccttctgatcccgacctggtgtctcctgatcgcctggctggtgggcgcggcgatgaca
attaccggttatctctccaacgacatcgtccagccggcgcttggcggcggtctcgttctg
atcgtgctgctgatcggcttcacggtgatgcagcacgcctttgctggcggcgcgatcgca
caaggcctgatctccgacatcgaacgcaaggcgctggcgctgactggggccggtgacatc
atctgggactgggacatcgaccgcgaccgcatctacaccggcaatgaagtcgaggatctc
ctgaacctgaaacgcggcacgctcgaaggaccggcacgcgactggctcgacatcctgcac
ccgcaggacagggaccggttccgggcgacgctcgatgccgtgatcgaccagcggcgcggc
aaggtcatgcagacgttccgcctgcgctccgaagacgggcatttccgctggttccgcctg
cgtgcccggccgatcatcggctccgatggcgaagtgatccgctgcgtcggcacgctgctc
gacgtgaccgaggagcgcaccgccgaagaacgcctgctgcatgatgccgtccacgacaat
ctgaccggcctgccgaaccgggaactgttcgtcgaccggctgcgcaccagcgtggtgcgc
gccaaggcggaagagacggccaagccgacgatcctggtgctcaatctcgaccggttcaaa
caggtcaatgacagcatcggcctgtcggctggcgacagtattctgctcaccgttgcccgg
cgtctcggccgcctgatcggccagcaggacacgcttggccgcctgtcgggcgaccaatat
ggccttgtgcttctgtctgaacaggaaccggaccggatcgttgcgctggcggatgccctg
cgcaaggccgtcagggccccgatcactttcggcgaccgcgagatcttcctgacctgctcc
gtcggcattgccttttacgaaggcggcaagcagggcgtggaggacatgctcaccaatgcc
gagatcgcactgaaccatgccaagcgcctcggcggggaccgccaggaagtgttccggccg
atcctgcgcccgctcgacaagaacatcgtcgacctggaagccgacctgcgcgaggcgatc
aagaaggaaacgcttggcgttttcttccagccgatcattcgtctggaagaccaggcggtt
gccgggttcgaggttctggcccgctggaaccacccgaaacgcgggaagatttccccctcg
gaattcattcccgtcgcggaacagtccggcctgatcaacgagctcggcatgtacatgctc
gataagggcgcgcagcagctggccttctggcagcgtgaattcccgctgccgcggccgctt
tttgcctcggtcaacctgtcgtcccgtcagctcctgaaacaggacctgatcaatgatgtg
aaggcggttctgtcccgcacatcggtggtgccgggcacgctgaagctggaactgaccgaa
tctctggtcatgtccaatccggaatattccgccaaggtgctggaacgcctgcgcggcctt
ggggcaggcctgtcgctggatgatttcggcacaggtcattcgtcgctgtcctatctgcag
cgtttcccgttcgacacgatcaagatcgaccagtcctttgtgaagccgaacagttcgtcc
gcgcggcctgtccttttgagaaccatggtggccatggggcacgatctcggcatgtcggtg
gtggcggaaggcgcggagagcgaaaacgacgcgctggagctctaccagctcggctgcgaa
tacgcgcagggcttcttcttcggcgaggccatgtccgccaacgaggccacaaggctcctg
cgcaagatgccggcagaggcggcggaaacggcttga
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