Labrenzia sp. VG12: CHH27_25870
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Entry
CHH27_25870 CDS
T04984
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
labr03036
]
CHH27_25870 (smc)
Chromosome and associated proteins [BR:
labr03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CHH27_25870 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
SMC_hinge
DUF713
AAA_29
Vac_Fusion
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ASP36253
UniProt:
A0A222FDF4
LinkDB
All DBs
Position
5605624..5609082
Genome browser
AA seq
1152 aa
AA seq
DB search
MKFSKLRIVGFKSFVEPMEFIIGNGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG
MDDVIFSGSLNRPARNTAEVTLFLENQDRTAPAAFNDADALEVSRRIEREQGSNYKINAR
DVRARDVQLLFADASTGARSPAMVRQGQIGELIAAKPTSRRQILEEAAGISGLHSRRHEA
EIRLRAAEQNLERLEDVLVQIDGQLDNLKRQSRQATRYRNLSSEIRAAEASILYIRWTEA
RDALGTAEGQFAEAQKQVNEATALQAESARVQAIAAHKLPELRDEAAKAGAALQRLVIAR
NELDAEERRVKERLQDLERRLVQLAEDVRREQSMVSENDEVLERLSEERAELLEENEMVQ
ERTETAREKVAEAEETVRGLETRLSDLTAAEARANAERRQLERAVAESRQRADRLVAQAQ
EAQQALNDLAAQMTDQDGVSENREALELAEEALTEAEAAAEEAETATLEARESEQAARGP
LSDAKQVLQGLETEARTLEQVLNVHADQDHTPVVEQVRVEPGYETALGAALGEDLDASLE
QAAAVKWGSSLPHGSDPALPDGVPMLADRVEAPTELTRRLRQIGLVSQDAGPGLRASLQP
GQCLVSREGDLWRWDGFVVAANAPTPAAQRLAQKNRLAELAEEIETARQKVLDQGQVLEA
AAAAVRQAVEHEQIARGKVRDGQRRTSAVREALAAAERAASQIAARKEAAQDRAGRLGEE
AELAREQVLEAEALLEEAPDATNFRDQIEALQGDVAAARSALAEARAVSEGLTREQQMRD
RRLEAIAREYDSWKTRAANAAQQISILKERQEEAEEERAELIEAPEDIELKRRELFSAIA
KAEETKKERDDRLSQAELDLSDVDRAAKAAMEAMAGAREQKIRAEERLEAARARKGDLER
RIDEDLEVSVAALPEIAGLKEGAPLPDPEAMERKLERLKAERERLGGVNLRAEEELREID
EQKTTLTSERDDLIEAIRRLRTGISNLNREARERLLASFEVVNGHFQRLFTHLFGGGTAE
LQLVDSDDPLDAGLEIIARPPGKKPQTMTLLSGGEQALTAMSLIFAVFLTNPAPICVLDE
VDAPLDDANVERYCDLLDEMAASTETRFVVITHNPITMARMNRLFGVTMAERGVSQLVSV
DLETAERFRETG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttcgaaactccgcattgtcggtttcaaatccttcgttgaaccgatggagttc
atcatcggcaacggcttgacaggtgtggtcgggccgaacggttgcggcaagtccaacctt
gtcgaggccctgcgctgggtgatgggggaaaactcctacaagaacatgcgtgcgtccggc
atggacgacgtgattttttccggcagcctcaaccgtccggcccgtaacacggccgaagtc
acgctgttcctggaaaaccaggaccggacggctcccgccgctttcaacgatgccgacgcg
ctggaggtcagccggcggatcgagcgcgagcagggctccaactacaagatcaatgcccgg
gacgtgcgtgcgcgtgacgtgcagctgctgtttgccgacgcctcgacaggggcccggtcg
ccggcgatggtccgtcagggccagatcggtgagctgattgccgccaagccgacatcgcgg
cgtcagatcctggaagaggccgccggcatttccggtctgcattcgcgccggcacgaggcc
gaaatcaggttgcgcgccgccgagcagaacctggagcgcctggaagatgtcctcgtgcag
atcgatggccagctggacaatctgaaacggcagtcgcgtcaggctacccgctaccggaat
ctctcctccgagatcagggcggcggaagcctcgatcctctacattcgctggacggaagcg
cgcgacgcgcttgggacagcagaaggtcaattcgccgaggcgcagaaacaggtcaacgag
gcaacggcgctgcaggccgaaagtgcccgcgtgcaggcaatcgccgcccacaagctgccg
gaactgcgtgacgaggctgccaaggccggcgccgccctgcagcgactggtaattgcccgc
aacgaactcgatgccgaagagcgcagggtcaaggagcggttgcaggacctcgaacggcgg
ctggtgcagctggccgaggatgtgcgccgcgaacagagcatggtctcggagaatgacgag
gtgctggaacggctctcggaagaacgcgccgagctgcttgaagaaaacgaaatggtgcag
gagcgtaccgagaccgcacgcgaaaaggtcgccgaggcggaggagacggtgcgcggactg
gagacccgtctgtcggatctcactgcagccgaggctcgtgcaaacgctgagcgcaggcag
ctggagcgggccgtggccgaaagccgccagcgcgccgaccggctggtcgcccaggcccag
gaggcccagcaggccttgaacgatcttgccgcccagatgacggatcaggacggcgtctcg
gaaaatcgtgaagcgctggaactggccgaggaggccctgaccgaggccgaagctgcggcc
gaagaggcggaaacggcaactctcgaagcgcgggaaagcgaacaggctgcgcgcggcccc
ttgagcgatgcaaagcaggtcctgcaagggttggagactgaagcgcgcactctggaacag
gtactgaacgttcatgccgaccaggaccatacgccggtcgtggagcaggtgcgggtcgag
cccggctacgaaacggccctcggtgccgcgcttggcgaggacctcgacgcgtcgctagaa
caggctgccgccgtcaagtggggcagcagcttgccacatgggagcgacccggccctgccg
gatggcgtgcccatgctggctgaccgtgtcgaagcgccgacagagcttacacgccggctg
cggcagatcgggctggtctcgcaggatgcgggtccgggtctgcgggcgtctctgcagccc
gggcagtgtcttgtatcccgggaaggcgacctgtggcgctgggacgggtttgtcgttgcc
gccaacgctccgacacctgcggcacaacggctagcccagaaaaaccggctggcggagctt
gccgaggaaatcgagacggcaaggcaaaaagtgttggaccaggggcaggttctggaagca
gccgcagcggccgttcgccaggcggtggagcacgaacagattgcgcgcggcaaggtgcgt
gacggccagcggcgcacgtcggccgtgcgcgaagcgctcgcggccgctgagcgggcagcg
tcccagatcgcagccaggaaggaagcggcccaggacagggcagggcgccttggcgaggag
gcggaacttgcgcgcgaacaggtgctggaggcagaggctctgctggaagaggcacccgat
gctacgaactttcgcgaccagatcgaggccttgcaaggggatgttgcggccgcgcgcagc
gccttggcagaggcgcgcgcggtctccgaaggcctgacacgcgaacagcagatgcgcgac
cgccgcctggaagcgatcgcacgcgaatatgacagctggaaaacccgggccgccaatgcc
gcgcagcagatttccatcctgaaagagcgtcaggaggaagccgaggaagagcgggccgag
ctgatcgaggcgccggaagatatcgagctcaagcgccgggagctgttttccgcaattgcc
aaggcggaagaaacaaagaaggaaagggacgaccgcctgtcccaggctgagctcgatctt
tcggatgtcgaccgcgcggccaaggcggcgatggaagccatggccggcgcacgcgaacag
aagatcagggcggaagaacggctcgaagcagcccgggcgcgcaagggcgacctggaacgg
cgcatcgatgaagacctggaagtctcggtcgcagcgctgcccgagattgccggcctcaag
gaaggcgcgcctctgcccgacccggaagccatggaacgcaagctggagcggctcaaggcg
gaacgggagcgtcttggcggggtcaacctgcgcgctgaggaagagctgcgggagatcgac
gagcagaaaaccacgctcacgtcggaacgggacgacctgatcgaggcgattcgcagactg
cgcaccggcatctccaacctcaaccgcgaggcgcgcgagcgcctgctggcctcctttgag
gtggtcaatggccacttccagaggctgttcacgcatcttttcggtggcggcacagcggag
cttcagctggtcgacagcgacgatcccctggatgccggtctcgaaatcattgcccgcccg
cccggcaagaagccgcagaccatgacgctgctgtccggcggcgagcaggcgctgacggcc
atgtcgttgatcttcgcggtgtttttgacgaatccggccccgatctgcgtgcttgacgag
gtcgatgcaccgctcgacgacgccaatgtggagcgctattgcgaccttctggacgagatg
gccgcgagcacggaaacgcggttcgtggtcatcacgcacaatccgatcaccatggcgcgc
atgaaccgcctgttcggtgtaaccatggccgaaaggggcgtttcgcagctcgtttcggtg
gatttggagacggcggaacgattccgcgaaaccggttag
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