Labrenzia sp. VG12: CHH27_26385
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Entry
CHH27_26385 CDS
T04984
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
labr
Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
labr03009
]
CHH27_26385
Enzymes [BR:
labr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
CHH27_26385
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
CHH27_26385
Ribosome biogenesis [BR:
labr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CHH27_26385
23S rRNA modification factors
CHH27_26385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_23
Methyltransf_12
S4_2
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
ASP36340
UniProt:
A0A222FC75
LinkDB
All DBs
Position
complement(5711446..5712186)
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AA seq
246 aa
AA seq
DB search
MSKHRLDQYLVDLGLFPSRARARDAILRGTVSVNGATCTKPAQKVGSDSTIKVEDPASRY
VSRAALKLIEGLDRFAIDPANLICLDIGASTGGFTQVLLERGAAKVHAIDVGHDQLHDLL
RGDARVVAREGLNARDLSLADLDGDRPDLLVSDVSFISLKLALPPALDLAAPGACGVFLV
KPQFEAGKENIGKGGLVDPDLAAETARSIQTWLGTVDGWSAADLVPSPVKGGDGNAEWLL
LGHKAL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacaccgcctcgaccagtatcttgtcgatctgggcctgttcccgagccgcgcc
agggcgcgtgatgccatcctgcgtggaacggtcagcgtcaatggagcaacctgcaccaaa
ccggcgcaaaaggttggttcggacagcacgatcaaagtcgaggacccggcgtcgcgctac
gtttccagggcggcgctgaagctgatcgagggtctggaccgctttgccatcgacccggca
aacctcatctgcctcgacattggtgcttcgaccggcggcttcacccaggtgctactggaa
cgcggagcggccaaagtccatgccatcgatgtcggccatgaccagttgcatgacctgctg
cgcggcgacgcacgcgttgtcgcaagggagggcctgaacgcccgcgacctgagccttgcc
gatctggacggcgaccggccggacctgcttgtgtccgatgtcagcttcatctcgctgaaa
ctggcccttcccccggctctcgatctggccgctcccggcgcttgcggcgtctttctggtc
aagccgcaattcgaggccggcaaggagaatatcggcaaaggcggactggtggatccggat
cttgccgcagaaaccgccagatctatacaaacctggctcgggacggtcgatggctggagc
gccgccgacctggtgccgtctcccgtcaaagggggcgacggcaatgcggaatggttgctt
ctggggcacaaggccctctga
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integrated database retrieval system
