Labrenzia sp. VG12: CHH27_26405
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Entry
CHH27_26405 CDS
T04984
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00730
Thiamine metabolism
labr00900
Terpenoid backbone biosynthesis
labr01100
Metabolic pathways
labr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CHH27_26405
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CHH27_26405
Enzymes [BR:
labr01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
CHH27_26405
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
E1_dh
TPP_enzyme_C
DUF5996
Motif
Other DBs
NCBI-ProteinID:
ASP36343
UniProt:
A0A222FDP6
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Position
complement(5715638..5717599)
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AA seq
653 aa
AA seq
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MPARQFSNRGAVSRVTSKPDTPLLDKVRSPADLRQLEEGELRQLADELRAETIDAVSITG
GHLGAGLGVVELTVALHYVFNTPDDRVIWDVGHQCYPHKILTERRDRIRTLRQGDGLSGF
TKRAESIYDPFGAAHSSTSISAGLGMAAARDLKGGDNNVIAVIGDGAMSAGMAYEAMNNA
GHLGSRLIVILNDNDMSIAPPVGAMSAYLAKLVSGPTYQTLRDAAKNLVKNLPKPVFEKA
ARAEEYARGFWTGGTLFEELGFYYVGPVDGHNLEHLLPVLKNVRDTHHGPVLIHAVTQKG
KGYGPAEGAKDKYHGVAKFDVVTGKQAKPKANAPSYTNVFATSLIKEAEADDKVVAITAA
MPDGTGLNLFGEAFPERTYDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVIH
DVAIQGLPVRFPIDRAGLVGADGPTHAGAFDTAFLSCLPGFVVMAAADEVELRHMVATAV
AYDDGPMSFRYPRGEGVGLEMPERGSVLEIGKGIIRREGTKVALLSFGGRMAECLKAAEE
LDAAGLSTTVADARFAKPLDMDLIRRLAREHEVLVTVEEGSVGGFGSHVLTRLAEEGLLD
NGLKVRTLALPDTYIDQDKPDAMYAAAGLNCDGIMKTVFAALGTEAMTAPQRA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccgccagttttctaatcgtggagcggtctccagagtgacttccaaaccagac
accccccttctcgacaaggttcgttcgccggctgaccttcgtcagcttgaagaaggcgaa
ctgcggcagctcgcagacgaactgcgcgccgaaacgatcgacgccgtgtcgatcaccggt
ggtcatctgggtgccgggctgggtgtggtcgagctgaccgttgcattgcactacgtgttc
aacacgccggacgacagggtcatctgggatgtcgggcatcaatgctacccgcacaagatc
ctgacggaacgccgcgaccggatccggacgcttcgccagggagatggattgtccggcttc
accaagcgcgcggaaagcatctacgatccttttggggccgcccattcctccacgtcgatt
tccgcgggcctcggcatggccgctgcgcgagatctcaagggcggcgacaacaatgtcatc
gccgtcattggcgacggggccatgtcggccggcatggcctacgaggccatgaacaatgcc
gggcatcttggctcgcggctgatcgtgatcctcaacgacaacgacatgtcgatcgcccct
cctgtcggcgccatgtcggcttacctggccaaacttgtgtccggcccgacctaccaaacc
cttcgcgacgcggcgaagaacctggtcaagaacctgcccaagccggtttttgaaaaggcg
gcgcgggcagaggaatatgcgcgcggtttctggaccggcggcacgctgttcgaagagctc
ggcttctactatgtcggaccggtcgacggccacaatctggaacacctgctgcctgtcctg
aaaaatgtccgtgacacgcatcacggcccggtactgattcacgcagtcacccagaagggc
aagggctatggacctgccgaaggggcaaaggacaaatatcacggcgtcgcgaaattcgac
gttgtcaccggcaagcaggccaagccgaaagccaatgcgccgagctacaccaacgtcttc
gccacgtccctgatcaaggaagctgaagcagatgacaaggtcgttgcgatcacggcggcc
atgccggacggcacgggactgaacctctttggcgaagcctttccggaacggacctatgac
gtcggcattgccgaacagcatgcagtgaccttcgccgccggtctggccacggaaggctac
aagccgtttgccgcaatctattccaccttccttcagcgcgcctatgaccaggtgatccac
gatgttgcgatccaggggctgccggtccgcttcccgatcgatcgcgccggtctggtcggc
gccgatggccccacacatgccggcgccttcgacacggctttcctgagctgtctgccgggt
ttcgtggtcatggccgcagcggacgaagtggaactgagacacatggtggcaaccgcggtt
gcctatgacgatggtccgatgtccttccgttatccgcgcggcgaaggtgttggcctggag
atgccggagcgcggcagcgtgcttgaaatcggcaagggcatcattcgccgtgaaggcacg
aaggttgctcttctgagcttcggtggccgcatggccgagtgcctgaaggcagccgaggaa
ctggatgccgcaggcctgtcgacaactgtcgccgacgcgcgtttcgcaaagccgctcgac
atggacctgatccgccgccttgcgcgggagcacgaggttctcgtgacggtcgaggaagga
tcggtcggaggcttcggcagccatgtcctgacccggctggcggaggaaggcctgctcgac
aacggtctgaaagtgcgcacgctcgccctgcccgatacctatatcgaccaggacaagcct
gacgccatgtacgcggccgccggcctgaactgcgacggcatcatgaagaccgtctttgct
gccctcggcacggaggcgatgaccgctccgcagcgcgcataa
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