Labrenzia sp. THAF35: FIU93_00965
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Entry
FIU93_00965 CDS
T06351
Symbol
groL5
Name
(GenBank) 60 kDa chaperonin 5
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIU93_00965 (groL5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
labt03019
]
FIU93_00965 (groL5)
03110 Chaperones and folding catalysts [BR:
labt03110
]
FIU93_00965 (groL5)
03029 Mitochondrial biogenesis [BR:
labt03029
]
FIU93_00965 (groL5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
labt04147
]
FIU93_00965 (groL5)
Enzymes [BR:
labt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FIU93_00965 (groL5)
Messenger RNA biogenesis [BR:
labt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FIU93_00965 (groL5)
Chaperones and folding catalysts [BR:
labt03110
]
Heat shock proteins
HSP60 / Chaperonin
FIU93_00965 (groL5)
Mitochondrial biogenesis [BR:
labt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FIU93_00965 (groL5)
Exosome [BR:
labt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FIU93_00965 (groL5)
Exosomal proteins of other body fluids (saliva and urine)
FIU93_00965 (groL5)
Exosomal proteins of breast cancer cells
FIU93_00965 (groL5)
Exosomal proteins of colorectal cancer cells
FIU93_00965 (groL5)
Exosomal proteins of bladder cancer cells
FIU93_00965 (groL5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
QFT65328
LinkDB
All DBs
Position
205093..206733
Genome browser
AA seq
546 aa
AA seq
DB search
MSAKEVKFSSDARERMLRGVDTLANAVKVTLGPKGRNVVLDKAFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVKEGAKAVAAGMNPMDLKRGV
DLAAAEAVKALTAASKTITTSGEVAQVGTISANGDEQVGKDIAEAMQKVGNEGVITVEEA
KSLETELEVVEGMQFDRGYLSPYFVTNADKMMADLEKPYILLHEKKLSNLQAMLPILEAV
VQSSRPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLENVTLDMLGTAEKVSITKENTTIVDGAGSKDDINGRVSQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVDDALNATRAAVEEGIVPGGGTALL
RAKKAVEGLASDNADIAAGIKIVLRALEAPIRQIAENAGVEGSIVVGKIQENDDPSFGFN
AQTEQFVNMIEAGIIDPTKVVRTALQDAASVAGLLITTEAMVAELPKKDAPAMPGGDMGG
MGGMGF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaaagaagtaaaattctcctccgacgcacgtgagcgcatgctgcgtggtgtc
gacaccctcgcaaacgccgtcaaggtgaccctcggcccgaaaggccgtaacgtcgttctc
gacaaggctttcggcgcaccgcgcatcaccaaggacggtgtgtctgttgccaaggaaatc
gaactggaagacaagttcgaaaacatgggcgcccagatggtgcgcgaagtggcttccaag
accaacgacatcgctggcgacggcaccaccaccgcgaccgttctggctcaggccatcgtc
aaggaaggcgccaaggctgttgcagccggcatgaacccgatggacctgaagcgcggcgtt
gatcttgctgctgctgaagccgtcaaggctctgaccgctgcttccaagaccatcaccacc
tctggtgaagttgcacaggtcggcacgatctccgctaacggcgacgagcaggtcggcaag
gacattgccgaagccatgcagaaagtcggcaacgaaggcgtgatcaccgtcgaggaagca
aagtccctcgaaaccgaactcgaagtcgttgaaggcatgcagttcgaccgcggctacctg
tctccttacttcgtcaccaacgctgacaagatgatggctgacctggaaaagccgtacatc
ctgctgcacgagaagaagctttccaacctgcaggccatgctgccgatcctggaagctgtt
gttcagtcttcccgtccgctgctgatcattgctgaagacgttgaaggcgaagcacttgcc
accctcgtcgtcaacaagctgcgtggcggcctgaagattgctgctgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgcgatcctgaccggcggcaccgtt
atctccgaagatctcggcatcaagctggaaaacgtgaccctcgacatgctcggcaccgcc
gagaaggtgtccatcaccaaggaaaacaccaccatcgttgacggtgctggctccaaggac
gacatcaacggccgcgtttcccagatcaaggctcagatcgaagaaaccacttccgattac
gaccgtgagaagctccaggagcgtcttgcaaagctcgcaggcggcgttgccgttatccgc
gttggcggtgcgaccgaaatcgaagtgaaagagaaaaaagaccgcgtcgacgacgctctg
aacgcaacccgcgctgccgttgaagaaggcatcgtcccgggtggcggtaccgctctgctg
cgcgccaagaaggcagtcgaaggcctggcctccgacaacgccgacatcgcagctggtatc
aagatcgtcctgcgcgctctggaagctccgatccgtcagatcgctgaaaacgctggtgtc
gaaggctccatcgttgttggcaagatccaggaaaacgacgatccgtccttcggcttcaac
gctcagaccgaacagttcgtcaacatgatcgaagctggcatcatcgacccgaccaaggtt
gtccgtactgctctgcaggacgcagcttccgtcgctggtctgctgatcaccaccgaagcc
atggttgctgaactgccgaagaaagacgctccggcaatgccgggcggcgacatgggcggc
atgggcggcatgggcttctaa
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