Labrenzia sp. THAF35: FIU93_03140
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Entry
FIU93_03140 CDS
T06351
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
labt
Labrenzia sp. THAF35
Pathway
labt03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
FIU93_03140 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
labt03011
]
FIU93_03140 (rpsA)
Ribosome [BR:
labt03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
FIU93_03140 (rpsA)
Bacteria
FIU93_03140 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RuvA_N
Motif
Other DBs
NCBI-ProteinID:
QFT65759
LinkDB
All DBs
Position
664458..666155
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AA seq
565 aa
AA seq
DB search
MSDYNPSMEDFSALLEESFVQNDLYEGAVVKGTVVAIEKDLAVIDVGLKVEGRVPLKEFG
AKGRDGEMKVGDEVEVYLERVENALGEAVLSREKARREESWVRLEVAFEANEKVNGQIFN
QVKGGFTVDLDGAVAFLPRSQVDIRPVRDVTPLMHTPQPFQILKMDKRRGNIVVSRRVVL
EETRAEQRSELVQSLEEGHTVEGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRINHPSEV
LTIGQTVKVQIIRVNQDTHRISLGMKQLETDPWDGIEAKYPIEAKFTGRVTNITDYGAFV
ELEPGIEGLIHVSEMSWTKKNVHPGKIVSTSQEVEVMILEVDPVKRRISLGLKQTLQNPW
DAFAEQFPIGTEVEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWNRPGEQVIEEFKKGDM
VKAVVLDVDVDKERISLGIKQLSGDPMESGAAGELRKNSVVTCEVIEIKDGGLDVKIADS
DLTAFIRRADLSRDREEQRPERYSVGDKFDARITQFDKKTRRVTVSIKALEIAEEKEAVA
QYGSSDSGASLGDILGAALKQQSED
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattacaatccctccatggaggatttctccgctcttctcgaagagtccttcgtt
cagaacgacctgtatgaaggtgccgtcgtaaagggcaccgtcgtcgcgatcgaaaaagac
ctggcagtcatcgacgtcggtctgaaggtcgaaggccgcgtgccgctgaaggaattcggc
gcaaaaggccgtgacggcgaaatgaaggtcggcgacgaagtcgaggtttacctggagcgc
gttgaaaacgctcttggcgaagctgttctgtcgcgcgaaaaagctcgccgcgaagaaagc
tgggtccgcctggaagttgctttcgaagcaaacgaaaaggtcaacggccagatcttcaac
caggtcaagggtggtttcaccgtcgatctggatggcgcagttgccttcctgccgcgttcg
caggtcgatatccgtccggttcgcgacgtgaccccgctgatgcacaccccacagccgttc
cagatcctgaagatggacaagcgccgcggcaacatcgtcgtgtctcgccgtgtcgttctg
gaagaaacccgcgccgaacagcgttcggaactggtccagagcctggaagaaggtcatacc
gtggaaggtgtggtcaagaacatcaccgattacggtgcgttcgtcgacctcggcggtatc
gatggcctgctgcacgtcaccgacatcgcgtggcgccgcatcaatcatccgtcggaagtt
ctcaccatcggccagaccgtcaaggtgcagatcatccgcgtcaaccaggacacgcatcgc
atcagcctcggcatgaagcagcttgaaaccgatccgtgggatggcatcgaagccaagtac
ccgatcgaagccaagttcactggccgcgtgaccaacatcaccgactacggcgcattcgtg
gaactggaaccgggcatcgaaggcctgatccacgtttccgaaatgtcctggaccaagaag
aacgtccatccgggcaagatcgtttccacttctcaggaagtcgaagtgatgatcctggaa
gtcgacccggtcaagcgccgcatctccctgggcctcaagcagaccctgcagaacccgtgg
gatgcatttgccgagcagttcccgatcggcaccgaagtcgaaggcgaagtcaagaacaag
accgaattcggcctgttcatcggcctcgacggcgacgtggacggcatggttcacctctcc
gacctcgactggaaccgcccgggcgagcaggttatcgaagagttcaagaagggcgacatg
gtcaaggccgtcgttctggatgttgacgtcgacaaggagcgtatctccctcggcatcaag
cagctttccggcgatccgatggaatcgggtgcagctggcgaactgcgcaagaactccgtc
gtgacctgtgaagtcatcgaaatcaaagacggcggcctggacgtcaagatcgcagacagc
gacctgactgccttcatccgtcgcgccgacctgtcccgcgatcgcgaggaacagcgtccg
gagcgttactccgttggcgacaagttcgatgcccgcatcacccagttcgacaagaagacc
cgtcgggtcaccgtgtcgatcaaggctctcgagatcgcagaagagaaggaagctgtcgct
cagtacggctcttccgacagcggtgcgtccctcggcgacatcctcggtgcagctctgaag
cagcagtccgaagactaa
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