Labrenzia sp. THAF35: FIU93_03220
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Entry
FIU93_03220 CDS
T06351
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
labt
Labrenzia sp. THAF35
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
labt03032
]
FIU93_03220 (ihfB)
03036 Chromosome and associated proteins [BR:
labt03036
]
FIU93_03220 (ihfB)
03400 DNA repair and recombination proteins [BR:
labt03400
]
FIU93_03220 (ihfB)
DNA replication proteins [BR:
labt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FIU93_03220 (ihfB)
Chromosome and associated proteins [BR:
labt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FIU93_03220 (ihfB)
DNA repair and recombination proteins [BR:
labt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FIU93_03220 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
HU-CCDC81_bac_1
XPC-binding
Motif
Other DBs
NCBI-ProteinID:
QFT65775
UniProt:
A0A9X7NJG3
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All DBs
Position
681402..681701
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AA seq
99 aa
AA seq
DB search
MIKSELVQHIAEQNPHLYQRDVENIVNAILDEVTEALMRGDRVELRGFGAFSVKNRPARV
GRNPRTGQKVEVDEKFVPFFKTGKEMRIRLNDGVDHGDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatctgagctggttcagcatatcgccgaacaaaatccgcatctctatcagcgg
gacgttgagaacatcgtcaacgccatcttggatgaggttaccgaagcgctcatgcgcggc
gaccgggtggagttgcgcggcttcggcgcgttttccgtcaagaaccgccctgcgcgcgtc
ggccgcaatccgcgaaccggtcaaaaggtggaagtggacgaaaagttcgtgcccttcttc
aaaaccggcaaggaaatgcgtatacggttgaacgatggtgtggaccacggcgacgactga
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