Labrenzia sp. THAF35: FIU93_03600
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Entry
FIU93_03600 CDS
T06351
Symbol
dnaX1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt03030
DNA replication
labt03430
Mismatch repair
labt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIU93_03600 (dnaX1)
03430 Mismatch repair
FIU93_03600 (dnaX1)
03440 Homologous recombination
FIU93_03600 (dnaX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
labt03032
]
FIU93_03600 (dnaX1)
03400 DNA repair and recombination proteins [BR:
labt03400
]
FIU93_03600 (dnaX1)
Enzymes [BR:
labt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIU93_03600 (dnaX1)
DNA replication proteins [BR:
labt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIU93_03600 (dnaX1)
DNA repair and recombination proteins [BR:
labt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIU93_03600 (dnaX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
RuvB_N
AAA_5
AAA_30
AAA_14
AAA_18
AAA_19
TsaE
TraI_hel_assoc_N
AAA_assoc_2
AAA_24
Rad17
DUF815
VapE-like_dom
SRP54
nSTAND3
RNA_helicase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QFT65851
LinkDB
All DBs
Position
complement(765443..767467)
Genome browser
AA seq
674 aa
AA seq
DB search
MRGLGKGFPEGIAARGSPTHKNFQKPVPLSEKMVMVRLMDETGFSESDGGQTPGLMADQG
AVKPATDDGAYRVLARKYRPKTFEDLVGQEPMVQTLENAFETGRIAQAWMLTGVRGVGKT
TTARILARGLNYEVPGVADKPTVKLTQEGTHCKAIMEGRHVDVIEMDAASHTGINDIREI
IDAARYRPATARYKVYIIDEVHMLSNAAFNGLLKTLEEPPEHVKFIFATTEIRKVPITVL
SRCQRFDLRRIEQSKLIGLLRRISDAEGIQISDEALMLIARAGEGSARDSLSLLDQAMAH
GAGAIEAEDLRQMLGLADRARVIDLFGHIMAGRIEDALGELQAQYEVGADPAIVLTDLAD
FTHLVTRMKVAPKSADEASVTEAERARGREFAEQISVRLLSRAWQILLKGVQEVQAASKP
LAAADMVLVRLAYAADLPDPGDLMAQIKNGQNPFGGAAPSGGGGAPAGGGGGTSAMAVGM
NYAPGSSGSGPTMQASARPQLSAIQGGRPAPQGVPQAAPEPQAQPAYNLKSLYDCAALAS
EKGDIPFKVKIQRLMRLVKFEPGKIEIQPTDDAPADIAGEFGRKLTEWTGQRWFVVVSRT
QGRPTIHEEQEANQQQLLSDAKSHPTVAALLAQFPGARVVDVKVQVTEEDDAALADPMVS
DPLLSEALGDDEDD
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcttgggcaaagggttccctgaaggtattgcggcccggggcagtccgacgcac
aaaaactttcaaaagcccgtcccactttccgaaaaaatggttatggtgcggctcatggac
gagacaggcttttccgaaagtgacggcgggcagacgccggggttgatggcggatcagggc
gcggtgaaaccggcgaccgacgatggtgcttaccgcgttcttgcgcgcaagtaccggccg
aagacgtttgaggatctggtcggccaggagccgatggtgcagacgctggaaaatgcgttt
gaaaccgggcggattgcgcaggcctggatgctgaccggggtgcgcggtgtcggcaagacc
accaccgcccgcatcctcgcgcggggcctcaattacgaagtgccgggcgttgccgacaag
ccgacggtgaaactcacgcaggaaggcacgcactgcaaggccatcatggaaggccgccat
gtcgacgtcatcgagatggacgccgcctcccacaccggcatcaacgatattcgcgagatc
atcgatgcggcccgctaccgcccggcaacggcgcgctacaaggtctacatcatcgacgaa
gtgcacatgctttcgaacgccgccttcaacggtctgctgaagacccttgaagagccgccg
gagcacgtgaagttcatcttcgcgacgacggagatccgcaaggtgccgatcacggtcctg
tcgcgctgccagcgtttcgacctgcgccggatcgaacaatccaagctgatcggtctgctg
cgccggatctccgatgccgagggcatccagatttccgacgaagccctgatgctgattgcc
cgtgcgggggaggggtcggcgcgcgattccctgtccctgctcgatcaggccatggcccat
ggcgccggcgccatcgaggcggaagacctgcgccagatgctgggtcttgcggaccgtgcc
cgggtgattgacctcttcggccacatcatggccggccggatcgaggacgccctgggcgaa
ctgcaggcgcaatatgaggtcggtgcggatccggccatcgtgctgacggacctggcggat
ttcacgcatcttgtcacgcgcatgaaggttgcgccgaaatcggctgacgaagcgtcggtg
accgaagctgaacgggcgcgcggccgggagtttgcagagcagatttccgttcggcttctg
tcccgcgcctggcagatcctcttgaagggtgttcaggaagttcaggccgcgtccaagcca
ctggccgctgcggacatggtgttggtgcgccttgcctatgccgcggacctgccggatccg
ggcgacctgatggcacagatcaagaatggccagaacccgtttggcggtgcggcaccatct
ggtggtggcggagcacctgccggtggtggcggtggtacatccgccatggctgtcggcatg
aactacgcgcccggcagttcgggcagtggcccgaccatgcaggcaagcgcccgtcctcag
ctctcggccatccagggcggcaggcccgcgcctcagggagtgccgcaagccgcgcccgaa
ccgcaggctcagccggcctataatctcaagagcctctacgattgcgccgcccttgcctcc
gagaagggcgacattccgttcaaggtcaagatccagcgactgatgcgtctggtgaaattc
gaacccggcaagatcgagatccagccgacggacgacgccccggccgatatcgccggcgag
ttcggccgcaaactgaccgaatggaccggacagcgctggtttgtcgtggtttcccgcact
cagggacgcccgaccatccacgaggagcaggaggccaaccagcagcaactcctgtccgac
gcgaagtcgcacccaaccgttgctgccctgctggcgcagttcccgggtgcccgtgttgtc
gacgtgaaggttcaggtcaccgaagaagacgacgctgctctggctgacccgatggtcagc
gatccgctcctgagcgaagcgctcggggatgacgaagacgattga
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