Labrenzia sp. THAF35: FIU93_03910
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Entry
FIU93_03910 CDS
T06351
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
labt
Labrenzia sp. THAF35
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
labt03016
]
FIU93_03910 (truB)
Enzymes [BR:
labt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FIU93_03910 (truB)
Transfer RNA biogenesis [BR:
labt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FIU93_03910 (truB)
Prokaryotic type
FIU93_03910 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF2802
Motif
Other DBs
NCBI-ProteinID:
QFT65910
UniProt:
A0A9X7NJP7
LinkDB
All DBs
Position
complement(832920..833864)
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AA seq
314 aa
AA seq
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MARQKQFKRKKNAINGWLVLDKPYGISSNEALGKIKRIFSPEKVGHAGTLDPRASGLLPV
AFGEATKTVPFVMDGRKVYRFEVTWGVETNTDDTEGEAVATSDVRPSADEISAVLGEFVG
TIMQVPPKFSAIKVAGERAYDLARDGEEVELEARPIDVHRLDLVERPDENRAVFEAECGK
GTYVRAIARDLGRRLGSRGHVTELRRLLVGPFAEEDLIGLDEIQEAAEALEEGAGVEALV
EEFVLPVREAMDNLIEVPVSLDDAARIRKGMAVLLRGRDAPLNTEVAFASHASVPVAIGS
IDKGRFQPTRVFHL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccaaaaacaattcaaaagaaaaaagaacgcaatcaacggatggctcgtgctg
gacaagccatatggcatctcctccaacgaggcgcttggcaagatcaagcggatcttctcg
ccggaaaaggtcggccatgccggaacgcttgatccgcgcgcgtccggcctcctgccggtt
gccttcggcgaagccacgaaaaccgtgcccttcgtcatggatggccgcaaggtctaccgt
ttcgaggtgacctggggcgtggaaaccaataccgacgacaccgaaggcgaggcggttgca
acgtccgacgtgcggccgagtgcggatgaaatctcggcagtccttggcgagtttgtcggc
acgatcatgcaggtcccgccgaaattctccgccatcaaggtcgccggtgaacgggcgtat
gatctggcgcgtgacggtgaggaagtcgaactggaagcccgtccgatcgacgtgcaccgg
ctggatctggttgaacgtccggatgagaaccgcgccgtcttcgaggctgaatgcggcaag
ggcacctatgtgcgggccatcgcacgcgatctcggccgccggctcggcagccgcggtcac
gtgaccgagttgcgccgtttgctggtcggtccgttcgccgaagaggacctgatcgggctg
gacgaaatccaggaagcagccgaggcgcttgaggaaggcgccggcgtcgaggctctggtc
gaggagttcgtcctgccggttcgtgaggcgatggacaatctgatcgaggtacccgtttcg
ctcgatgacgcggccaggatccgcaagggcatggccgtgctgctacgcggccgggatgct
ccgctcaacacggaagtcgcctttgccagccacgccagcgtgccggtcgccatcggctca
attgacaagggccggttccagccgaccagggtgtttcacctgtaa
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