Labrenzia sp. THAF35: FIU93_04075
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Entry
FIU93_04075 CDS
T06351
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU93_04075 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labt03400
]
FIU93_04075 (mutM)
Enzymes [BR:
labt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FIU93_04075 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FIU93_04075 (mutM)
DNA repair and recombination proteins [BR:
labt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIU93_04075 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QFT65943
UniProt:
A0A9X7NJD9
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All DBs
Position
867183..868100
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AA seq
305 aa
AA seq
DB search
MTADTRPLMPELPEVETVKRGLAPTFEGALIAKVDQNRPDLRFPFPDGFADRLTGRRLTV
LSRRSKYLLGDVDSGDVLVMHLGMSGSFRIENDLSADTPGAFAHARSKDPKHDHVVFHLE
TIDGGRTRIVYNDPRRFGFMDLIARPVLADHPFFRELGLEPLGNDLGGETLARLFNGRKT
PLKAALLNQKLIAGLGNIYVCEALWRTGLSPERAAGTLVTKTGKPTKKAEELAANIRATL
EDAIRAGGSSLRDHTQADGTLGYFQHSFAVYDREGQACRTPGCKGTVARLVQSNRSTFHC
PTCQS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggataccagacctctcatgcccgaactcccggaagtcgaaaccgtcaagcgc
ggccttgcccccactttcgaaggggctctgattgccaaggtcgaccagaaccggcccgat
ctgcgctttccttttccggacggtttcgccgaccgcttgaccggacgacggctgaccgtg
ctgtcgcgccggtcgaaatacctgttgggcgatgtcgacagcggcgatgtgctggtcatg
caccttggcatgtctggatcgttccggatcgaaaacgatctttccgcggatacgccgggc
gcctttgcccatgcgcgcagcaaggaccccaaacacgaccatgtcgtcttccatctggag
acaattgacggcgggcgaacccggatcgtctacaacgacccgcgccggttcggcttcatg
gatctcattgcccgtcccgtgctcgcagaccatccctttttccgtgaactcggcctggag
ccactcggcaacgaccttggcggcgaaacactggcgcggcttttcaacggccggaagacg
ccgctgaaggcggccctgctcaaccagaaactgattgcgggccttggcaacatatatgtg
tgcgaagcgctctggcgcaccgggctcagcccggaacgggctgccggcacgctggtgacg
aaaacaggcaagccgacaaaaaaggcggaagaactggccgccaatatccgcgccaccctg
gaagatgccatcagggcgggcgggtcttcgctgcgcgatcacacccaggcagacggcacg
cttggctactttcagcactcgtttgccgtctacgaccgcgaaggccaggcctgccggaca
ccgggctgcaagggcaccgtcgcccggctggtccagtccaaccggtcaaccttccactgc
ccgacctgccagagctga
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