Labrenzia sp. THAF35: FIU93_06020
Help
Entry
FIU93_06020 CDS
T06351
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt02024
Quorum sensing
labt03060
Protein export
labt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FIU93_06020 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FIU93_06020 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU93_06020 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
labt02044
]
FIU93_06020 (ffh)
Enzymes [BR:
labt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
FIU93_06020 (ffh)
Secretion system [BR:
labt02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FIU93_06020 (ffh)
Eukaryotic Sec-SRP protein
FIU93_06020 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_33
AAA_19
ArsA_ATPase
AAA_30
AAA_14
nSTAND_NTPase5
AAA_22
ABC_tran
AAA_16
ResIII
6PF2K
Thymidylate_kin
AAA_17
AAA_5
AAA_25
AAA_31
APS_kinase
AAA
TrwB_AAD_bind
NACHT
YqeC
TctA
Motif
Other DBs
NCBI-ProteinID:
QFT66323
LinkDB
All DBs
Position
1297120..1298661
Genome browser
AA seq
513 aa
AA seq
DB search
MFESLSDRLSGIFDKLTGRGALSENDVNEALREIRRALIEADVALPIVRSFTDKVRNRAV
GAEVVKSVTPGQMVVKIVHDQLVEMLGEEAHPIDLNAPAPVAIMMVGLQGSGKTTTTAKI
ARRLTQRDKRKVLMASLDTRRPAAQEQLKVLGEQNDIDTLPIVAGQGPVEIAKRAMSAAK
LGGYDVVMLDTAGRIHIDEPLMVEMAEVKAAAQPHEILLVADSLTGQDAVNLAQSFDERV
GITGIALTRMDGDGRGGAALSMQAVTGKPVKLIGTGEKSDALEDFHPRRIADRILGMGDI
VSLVEKAAEAIDAEQAAKMAKKMQKGHFDLEDLAEQLRQMEKLGGMSGMMGMLPGIGKMK
KQIEASNIDDKMFKRQVAIIESMTPAERQKPELLKASRKKRIAAGSGMDVADVNKLLKMH
RQMADMMKKMGKGKGMLGKLMGGLGGGGMPDVDPKQLEEMAKSGQLPGGMEMPKGLPGGL
GGGLPPGMGMPGLPGLGGPKLPGFPGMGKGKKR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaagcctgtccgatcgattaagcggtattttcgacaagctcaccggccgcggt
gcgctgtcggaaaacgacgtcaacgaggcgctgcgcgaaatccgccgcgcgctgatcgag
gccgacgttgcgctgccgatcgtacgttccttcaccgacaaggtgcgcaatcgcgccgtc
ggtgccgaggtggtcaagtccgtgaccccgggccagatggtcgtgaagatcgttcatgac
cagctggtcgagatgctcggtgaagaagctcatccgatcgacctgaacgctccggcaccg
gtggcgatcatgatggtcggtctgcagggctccggtaaaaccaccaccacggccaagatt
gcccgtcgcctgacccagcgcgacaagcgcaaggtgctgatggcatcgctcgacacccgc
cgtccggctgcccaggagcagctgaaggttctgggtgagcagaacgacatcgacacgctg
ccgatcgttgccggccagggcccggtcgaaatcgccaagcgggccatgtccgccgccaag
ctcggcggttatgacgtggtcatgctcgacaccgccggccgtattcacatcgacgagccg
ctgatggttgaaatggcagaggtgaaagccgctgcccagccgcatgaaatcctgctggtg
gcggatagcctgaccggtcaggacgccgtcaacctggcgcagagtttcgatgagcgcgtc
ggcatcaccggtatcgccctgacccgtatggacggcgacggccgcggcggtgcggcgctc
tccatgcaggcggttaccggcaagccggtcaagctgatcggtaccggcgaaaaatcagac
gcacttgaagacttccacccgcgccggatcgcagaccgcatcctcggcatgggcgacatc
gtctcgctggtggaaaaggctgcagaagccatcgacgcggaacaggccgcgaaaatggcg
aagaagatgcagaagggtcacttcgacctggaagatctcgccgagcagctgcgccagatg
gaaaagctgggcggcatgtccggcatgatgggaatgttgccgggcatcggcaagatgaag
aagcagatcgaggcttcgaacatcgacgacaagatgttcaagcgtcaggtcgccatcatc
gaatcgatgacaccggccgagcgtcagaagcccgaactgctcaaggccagccgcaagaag
cgtattgcagccgggtcgggcatggatgtggccgacgtcaacaagcttctgaaaatgcac
cgccagatggcggacatgatgaagaagatgggcaagggcaaaggcatgctgggcaagctg
atgggcggccttggcggcggcggaatgccggatgtcgatcccaagcagcttgaggaaatg
gccaagtccggccagttgccgggtggcatggaaatgccgaaaggcctgcccggcgggttg
ggcggcggtctgccgccaggcatgggcatgccgggtcttccaggccttggcggtccgaaa
ctccccgggtttccgggtatgggcaagggcaagaaacgatga
DBGET
integrated database retrieval system
