Labrenzia sp. THAF35: FIU93_09125
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Entry
FIU93_09125 CDS
T06351
Symbol
clpB1
Name
(GenBank) Chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
labt
Labrenzia sp. THAF35
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
labt03110
]
FIU93_09125 (clpB1)
Chaperones and folding catalysts [BR:
labt03110
]
Heat shock proteins
HSP100
FIU93_09125 (clpB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_23
nSTAND3
TniB
AAA_7
IstB_IS21
bpMoxR
AAA_24
NACHT
AAA_25
T2SSE
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
QFT66940
LinkDB
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Position
1937079..1939676
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AA seq
865 aa
AA seq
DB search
MNFEKYTERARGFVQSAQTFALGRGHQQFAPEHILKVLLDDPEGMASGLIDRAGGNAKAL
KGDLEGLLDKMPKVSGGSGQLYMGQATARLFEQAEKIADKAGDSFVTVERLLLALAMDSD
SETGKLMKRHGITPNGLNEAINQLRQGRTADTATAENQYDALKKFARDLTQVAREGKLDP
VIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKQLLA
LDMGSLIAGAKYRGEFEERLKGVLSEVQAAAGKVILFIDEMHTLVGAGKADGAMDASNLL
KPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKEKYEL
HHGVRITDSAIVSAASLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDELDRRI
IQLKIEREALKAESDEASKDRLSRLEKELTDLEEKSQALSNRWQGEKEKLNLEQKIKEQL
EQARIDLEIAQRRGDLAKAGELAYGVVPELERKLAEAEASEDADAMVDEAVTPAHIAQVV
SKWTGIPVDKMLEGEREKLLQMEDMLANRVIGQAEAIHAVSTAVRRARAGLQDPNRPIGS
FMFLGPTGVGKTELTKALASFLFDDDSAMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGG
ALTEAVRRRPYQVVLFDEIEKAHSDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNL
GAEYLVNQPEGQDTDAVRDEVMSAVRGHFRPEFLNRLDEIVLFHRLQRSQMADIVKIQLE
RLRALLSDRKITLKLDDGALGWLAQKGYDPAYGARPLKRVIQKDVQDPLAEKLLAGEILD
GQTVDVTAGSDRLMFQVEGSESAAA
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaaaaatacactgagcgtgcgcgcggttttgttcagtccgctcagaccttt
gccttggggcggggccatcagcaattcgcacctgaacacatcctgaaggttcttctggat
gatcccgaaggcatggccagtggcctgatcgaccgtgccggcggcaacgccaaggcattg
aagggcgatcttgagggccttctggacaagatgccgaaagtttccggtgggtccggacag
ctttacatgggccaggcaaccgcacgcctgttcgagcaggccgagaagatcgccgacaag
gccggagacagtttcgtcaccgtggagcggcttctgctcgcccttgccatggacagcgac
agcgagactggcaaactgatgaagcggcacggcattacgccaaacggactgaacgaggca
atcaaccagcttcgccagggccggacggccgataccgcgactgccgaaaaccagtatgac
gcgctgaagaaattcgctcgggatctgacccaggttgcccgggaaggcaaactcgacccg
gtgatcggccgtgacgaggaaatccgccggaccatccaggtcctgtcgcgccgtaccaag
aacaatccggttttgattggtgagccaggggtcggcaaaactgcgattgccgagggcctt
gcgctgcgcatcgtcaatggcgatgtgccggaatcgctcaaggacaagcagcttcttgcg
ctcgacatgggctcgctgattgctggcgcgaaataccggggtgagttcgaggaacgcctg
aagggtgttctgtccgaagtccaggcggccgcgggcaaggtaatcctgttcatcgatgag
atgcacacgctggttggcgccggcaaggcggatggggccatggatgcctccaacctcttg
aagcctgctctggcgcgcggtgagctgcactgtgtcggtgcgaccacgctggacgaatac
cgcaagcacgttgaaaaggacgccgctctggcacgccggttccagcctgtgttcgtgagc
gagccgacggtcgaggacacggtttcgatccttcgcgggatcaaggagaaatacgaactc
catcacggggtccgtatcaccgacagtgccatcgtctcggcagcgtctctttccaaccgc
tacatcaccgaccggttcctgccggacaaggcgatcgatcttgtggacgaagccgccagc
cggctgcggatgcaggtcgacagcaagccggaggaactggatgaactggatcgccggatc
atccagctcaagatcgagcgcgaggcgctgaaggcagaaagcgacgaagcttcaaaggat
cgcctgtccaggctcgagaaggagctgacggatctggaagaaaagtcgcaggcactcagc
aaccgctggcagggcgagaaggaaaagctgaaccttgaacagaagatcaaggaacagctg
gaacaggcccgcatcgacctggaaatcgcgcagcgtcgcggtgatctggccaaggctggt
gagcttgcctacggcgtggttccggagctggagcgcaaactcgccgaagcggaagcttca
gaggatgccgatgccatggtcgatgaggccgtgacgccggctcatattgcccaggtcgtt
tcgaagtggaccggaattccggtcgacaagatgctggaaggcgagcgcgaaaagctgctt
cagatggaagacatgctggcgaaccgggtcattggccaggcagaagccattcatgcggtt
tccactgcggtgcgccgggcgcgtgccggtctgcaggatccgaacaggccgattggctcg
ttcatgttcctcggaccgaccggtgtcggcaagaccgagctgaccaaggcacttgcgtcg
ttcctcttcgatgacgacagcgcaatggtgcggatcgacatgtcggaatacatggagaag
cactccgtttcccgtctgatcggcgcgcctcccggctatgtcggatacgaggaaggtggt
gcgttgacggaagccgttcggcggcgcccgtatcaggtcgtgcttttcgacgaaatcgaa
aaggcgcatagtgacgtgttcaacgtgctgttgcaggttctggacgacggtcggctgacc
gatggtcagggccggacggtcgacttccgcaacacgctgatcatcatgacctcgaacctg
ggggccgagtatctggtcaaccagccggaaggtcaggatacggatgcggttcgcgacgag
gtgatgagcgccgtgcggggtcatttccgtccggagttcctgaaccgtctcgatgagatc
gtgctgttccatcgcctgcagcggtcgcagatggccgatatcgtcaagatccagctggag
cgcctgcgggctctcctcagcgatcgcaagatcacgctgaaactggacgacggcgctctc
ggttggctggcccagaagggctacgacccagcctatggagcgaggccgctgaaacgggtg
atccagaaggacgttcaggatcctctcgccgaaaagctgcttgccggcgaaatcctcgac
ggccagacggtggatgtcacggctgggtcagaccgcctgatgttccaggtggaaggttcg
gaaagcgcagccgcctga
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