Labrenzia sp. THAF35: FIU93_09245
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Entry
FIU93_09245 CDS
T06351
Symbol
gabR1
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
labt
Labrenzia sp. THAF35
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
labt03000
]
FIU93_09245 (gabR1)
Transcription factors [BR:
labt03000
]
Prokaryotic type
Helix-turn-helix
GntR family
FIU93_09245 (gabR1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
HTH_24
HTH_Crp_2
HTH_CodY
HTH_11
HTH_50
MarR
TrmB
Motif
Other DBs
NCBI-ProteinID:
QFT66958
LinkDB
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Position
complement(1970870..1972357)
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AA seq
495 aa
AA seq
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MKRHAGAVLSSIKIDKTAEKKISIQLYMALRDLLLTGALTPGDRMPATRTLAQEIGVSRT
TVIDATDRLISEGLLEARVGAGTFVSEALNARLAPKPSQEASDITPVVPRLSHATRHAIP
DFTLRSRLPHKSQAFVTALPALDAFPMAQWAKLSARHWRKDRDHIAGYGEPFGYMPLRRA
IARQLNASRGIKCDPEQIFITNGAQRAFSLVGGMLVNPGEPIWFENPGAIGARNAFVAIG
ARPIPVAVDEEGLCIEDGLAKAPYFRLAFVTPSHQQPLGHVMSLSRRLALLTAANEADAM
IVEDDYDGEFYFGDQPPPTLKSIDTHGRVIYVGTFSKSLFPALRLGFVLVPEGLVESFER
VCLTWLAGVPTVTQAIVAEFMDEGMFATHIRTMRQLYKHRHDTLMAESASLAGDIDLQPT
SSGFHAVGLLSNRYDEDRIVAEAAKHGITTAPLSRYALGRIPQRGIVLGFGSSAQDDIRK
GMKVLKKILPVCCTS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcatgccggcgctgtgctctcgtcgatcaagatcgacaagacggccgaaaag
aaaatttcgatccagctctacatggctctgcgcgacctgttgctgacgggggcattgacc
ccgggtgaccggatgccggccacacgcaccctggcgcaggagatcggcgtctcccgcacg
acggtaatcgatgcgaccgaccgcctgatttccgagggtcttctggaggcaagggtaggc
gctggcacgttcgtgagtgaagcgctgaacgcccgccttgcaccgaagccgtcacaggag
gccagcgacatcacccccgtcgtgccgcgcctttcccacgcgacccggcatgccatcccg
gatttcaccttgcgctcgcgcctgccgcacaaatcgcaggccttcgtcacagcactgccg
gcgctcgacgcctttccgatggcgcaatgggcaaaactctccgcgcggcactggcgcaag
gaccgcgaccacattgccggctatggcgaacccttcggctacatgccgctgcgccgggcg
attgcccgtcagctcaatgcctcccgcggcatcaagtgcgaccccgaacagatattcatc
accaacggcgcccagcgcgcattttccctggtcggcggcatgctggtcaatccgggcgag
ccgatctggtttgaaaatcctggcgcaattggtgcgcgcaacgcttttgttgccattggc
gcaaggccaattccagtcgccgttgacgaggaaggcctttgcatcgaggacggccttgcc
aaggcgccctactttcggctcgccttcgtaacgccatcgcaccagcagccgcttggccac
gtcatgagcctttcccgccgcctggcgcttctgacagccgccaatgaagccgacgccatg
atcgtggaggacgactacgacggcgagttctatttcggcgaccagccaccaccaacactc
aagagcatcgatacccacggccgggtaatctatgtcggcaccttctccaagtccctgttt
ccggccctcaggctcggcttcgttctggtgccggaaggcctggtggaaagcttcgagcgg
gtctgcttgacctggcttgccggtgttccgaccgtcacccaggcgatcgttgccgaattc
atggatgaaggcatgttcgcaacacacatccgcaccatgcgccaactctacaagcaccgt
cacgacaccttgatggcagaaagcgccagtcttgcaggagacattgacctgcagccaacc
agcagcggctttcacgctgtcggccttttgtcgaaccgatacgacgaagacaggatcgtc
gctgaagcggccaaacacggcatcaccaccgcccccctgtctcgctacgctcttggccgg
ataccgcagcgcggcattgtcctcggcttcggcagctccgcgcaggatgacatccgcaaa
ggcatgaaggttctcaagaaaatcctgcctgtttgctgcaccagctaa
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