Labrenzia sp. THAF35: FIU93_10910
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Entry
FIU93_10910 CDS
T06351
Symbol
apxIB1
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
labt
Labrenzia sp. THAF35
Pathway
labt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FIU93_10910 (apxIB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labt02000
]
FIU93_10910 (apxIB1)
02044 Secretion system [BR:
labt02044
]
FIU93_10910 (apxIB1)
Transporters [BR:
labt02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FIU93_10910 (apxIB1)
Secretion system [BR:
labt02044
]
Type I secretion system
Adhesin protein transporter
FIU93_10910 (apxIB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
nSTAND1
AAA_29
AAA_22
AAA
AAA_23
RsgA_GTPase
ATPase_2
cobW
Rad17
nSTAND3
AAA_19
AAA_30
AAA_21
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QFT67281
UniProt:
A0A9X7NLE7
LinkDB
All DBs
Position
complement(2346211..2348397)
Genome browser
AA seq
728 aa
AA seq
DB search
MSLAAFENADSIFQNLNPAESRMNLETRVQQHSGSTIDRASPAEACLLPLLEALGWDGME
RHLFEALPHLEGIKGIFDLRAVLTRLNFRVTPTGRSAKQLTAEQFPCLVKHGDNLLVGLG
RTSDGRFQAYSGEAHRTVAIAFSELKDAEIFVIEPDDSTESAGFQHWSSRLFHQFRGTVL
SIMTVGLLSNILALGLPLFVMSVYDKAIGAKSVSVLVTLLIGIALVLIMDWMVRGTKSHL
QAYLGARLDAVVANTTFRHFLHLPLPLISSAPIGAQITRLKQFDGVRDVFHGNLANALID
LPFSVIFVMVLGFIGGPLALLPAGLLVLYVLSAMLIVPRMKQAINQAGDAKSRMQNITVE
ILSKRKAIRELSADDIWVEKYRAISADFALKNLKTRQLSQVMQVVSQMFMTLCGIGVLGF
GAVLVMNQDLSQGALIAVMALSWRALSPMHQAFLSVSQLGQAQQTIERINSLLKIEMERQ
PGRLPSLHRQFQGTIRFSNVVLRYPSRQEPALRNFSLQMEQGSVTAITGPSGCGKTSLVR
AVLGLYRPQMGAVLVDDLDIRQLDPGEWRNSIGYAPEHHDFFYGTIAQNFRMANPQADND
QVRKAFEEFGLNAYGELLPQGVETRLTGQLIEVLPDNVKQRLLLARAFMRPAPIYLLDNP
AGNLDFEGDKFLMKKIDQVRGKSTVVITTYRPSHMRMADNLVYMQNGMVAMAGAPKDILE
DVLKQQSK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggcggcttttgaaaacgcggattcgatctttcagaacctgaacccggcagag
agccggatgaacctggaaacccgtgtccagcagcattcaggcagtacgatcgaccgcgcg
tctccggcagaggcctgtttgctgcccctgctggaagccctcggctgggatggcatggaa
cgccatctcttcgaagccctgcctcaccttgaaggcataaagggcatcttcgaccttcgc
gccgtgctgacccggctgaattttcgggtcactccgaccggccgatccgcaaagcagctg
accgcggaacagtttccctgcctggtgaaacacggagacaatctgctggtcggcctaggg
cgcacaagcgacggccggttccaggcctacagcggcgaggctcatcgcacggtcgccatt
gccttcagcgaactcaaggatgccgagatcttcgtgatcgagccggatgacagcaccgaa
agcgccggttttcagcactggtcctcccgcctgttccatcagttccggggcacggtgctg
tcgatcatgaccgtcggcctgctgtcgaacatcctggctctcggtctgcctctctttgtc
atgagcgtttacgacaaggctatcggcgccaaatccgtttccgtgctggtcacactgctg
atcggcattgcgcttgtgctgatcatggactggatggtcagaggcaccaaatcgcatctc
caggcctacctgggcgccaggctcgacgcggtggtcgccaacaccaccttccgccatttc
ctgcatctgccgctccccctgatttcgtctgcccccatcggagcacaaatcacccgtctg
aagcagttcgacggcgtgcgggacgtctttcacggcaatctcgccaatgcgttgatcgac
cttcccttctcggtaattttcgtcatggttctcggcttcattggcgggccgctggcactg
ctgccggctgggctgctggtgctctatgtcctgtcggccatgctcatcgttccgcgcatg
aaacaggcaatcaatcaggccggcgatgcaaaatcgcgcatgcagaacatcactgtggag
atcctgtcgaagcgaaaggccatccgggagctgtctgccgacgacatctgggtcgagaaa
taccgggcgatttccgcggactttgcgctgaagaacctgaagacgaggcaactgtcgcag
gtcatgcaagtggtctcgcagatgttcatgaccctgtgcggcatcggtgtcctcggtttc
ggagccgttctggtcatgaaccaggacctttctcaaggcgcgctcattgccgtcatggcc
ctttcctggcgtgcgctcagcccgatgcatcaggcctttctcagcgtatcgcaactgggc
caggcccagcagacgatcgaacggatcaacagccttctgaaaatcgaaatggaacgccag
cccggcaggctgccgagcctgcaccgccagttccagggcacgatccgcttttccaacgtc
gtgctgcgctatccttcccgccaggaaccagccttgcgcaatttttcgcttcagatggag
cagggatccgtaaccgcgatcaccggcccgagcggttgcggcaagacctcgctggtgcgg
gccgtgctcgggctttatcgaccccagatgggcgctgtccttgtcgacgatctcgacatc
cgccagctcgacccgggcgaatggcgcaactccatcggctacgcaccggaacaccacgat
ttcttctacggtacgattgcgcagaacttccgcatggccaatccgcaggcggacaacgat
caggttcgcaaggccttcgaggaattcggcctcaacgcctatggcgagcttctgccccag
ggtgtggagacccggttgaccggccagctgatcgaagtgctgccggacaacgtcaaacag
cgcctgctgctggccagggccttcatgcgccctgccccgatctatctgctagacaaccct
gccggcaatctggatttcgaaggcgacaagttcctgatgaagaagatcgaccaggttcgc
ggcaagtcgaccgtcgtcatcacgacctaccgccccagccacatgcgcatggcagacaac
ctcgtctacatgcagaacggcatggtggcgatggccggagccccgaaggacatccttgaa
gacgtgctcaagcagcaatcgaaataa
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