Labrenzia sp. THAF35: FIU93_12215
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Entry
FIU93_12215 CDS
T06351
Symbol
oprF3
Name
(GenBank) Outer membrane porin F precursor
KO
K03286
OmpA-OmpF porin, OOP family
Organism
labt
Labrenzia sp. THAF35
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labt02000
]
FIU93_12215 (oprF3)
Transporters [BR:
labt02000
]
Other transporters
Pores ion channels [TC:
1
]
FIU93_12215 (oprF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
QFT67542
LinkDB
All DBs
Position
complement(2641355..2642341)
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AA seq
328 aa
AA seq
DB search
MSLTRTVLPARLMHLAGLAVSAVIALPLLTTDASAQLVSCESIQKDWLAMPLSAGHEDRV
RIYDQAFNDSDCDGMVVEGFGKEIIDARLDVIAPFQDLEGYTGNLETLKQDLADIQEFGS
HWRISYLLGEILRKQQQTLPAFRAYQEALGLVDDTELTPAEPAHAMIARLRDRLDELAVV
VAQISEEPADIKIPVTRSGQSISQYSFSTRGYKRKKTLVPIQFVYDQDVMTKAGRTSFED
VQEALEKQGSPDIQVVGHTDPVGSDAYNMQLSMKRAEAVRSALLAAGYSGSIEVLGMGES
QPFQFDDPSLYTEDVRNQAHRRVEFVQK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttacccgaactgttttacccgcccgccttatgcatctggcaggccttgccgtc
tccgccgtcatcgccctgcccctcctgaccactgacgcatccgcccaactcgtttcatgc
gagagcattcagaaggactggcttgcgatgccgctgagcgccggtcacgaagaccgcgtc
aggatctacgaccaggccttcaatgacagcgattgcgacggcatggtggtggaaggcttc
ggcaaggaaatcatcgatgcccggctcgacgtcatcgcgccgtttcaggatcttgaaggc
tataccggcaaccttgaaaccctgaaacaggacctggccgacattcaggaattcggcagc
cactggcgtatttcctatctgctcggagaaattctgcgcaagcagcagcaaaccctgccc
gcgttccgcgcttatcaggaagcccttggcctggtggacgacaccgagctgacccctgcg
gaaccggcacatgccatgatcgcccggctgcgcgaccgcctggatgaactggcagtggtc
gtggcccagatttcagaggaaccggcagacatcaagatcccggtcacccgcagtggacag
tcgatctcgcaatacagcttttccacgcgcggctacaaacgcaagaagacgctggttccg
atccagttcgtctatgatcaggatgtcatgaccaaagccggtcggaccagctttgaagac
gtgcaggaggccctggaaaagcagggctccccggacatccaggtcgtcggccataccgat
ccggtcggctctgatgcctacaacatgcaactgtccatgaagcgtgccgaggccgtacgt
agcgccttgctggcagccggatactccggctccatcgaggtgcttggcatgggtgaaagc
cagccgttccagttcgacgatccatccctctacaccgaggacgtgcgcaatcaggcgcac
cgacgtgttgaattcgtccagaaatag
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