Labrenzia sp. THAF35: FIU93_14345
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Entry
FIU93_14345 CDS
T06351
Symbol
cdhR4
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
labt
Labrenzia sp. THAF35
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
labt03000
]
FIU93_14345 (cdhR4)
Transcription factors [BR:
labt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FIU93_14345 (cdhR4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QFT67964
UniProt:
A0A9X7RH80
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All DBs
Position
3121000..3121947
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AA seq
315 aa
AA seq
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MPISQKSNSVRKICVLLFESFSNHCLANAIEPFRAANTIARKQLYSWQHVSLAGGTVTSS
SGLPVATSAWSEAKPGGDYLFIMPSYGFEAFAGQSTVRALKAARQRFGTLVGMDTGAWLL
AAAGLLEERKATIHWDELTGFAERFPDVDAVEDRFVLDGNICTCGGASTTFELALELIKR
HHSPMFALEVAALFMYGDKLDMHDPHKRLSADALVRSATALMRRTIEAPMPIEDLARQLK
VDQRTLEHRFQREMSMTPLGVYKAIRLREARRLVELTMLGIAEIAERCGYRNASAMTRAY
RQEFGQSPREHRRRR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttcacaaaaatcgaattcggttcgaaaaatctgcgtgctgttgttcgaaagc
ttttcgaaccactgcctggcgaatgcgatcgagccgttccgggcagcaaacacgattgcc
cgaaagcagctctattcctggcagcacgtgagccttgccggagggaccgtcacgtcatcc
agcggtctgccggtggcgacgtctgcctggtcggaggcaaagcctggtggcgattatctc
ttcatcatgccgagctacggtttcgaggcttttgcaggtcagtcaaccgtgcgcgccttg
aaggccgcaaggcaacggttcggcacgttggtcggcatggataccggcgcatggctgttg
gcggccgccggtttgctggaggaacgcaaggcaacgatccactgggatgaactgacggga
tttgccgaaagatttccggatgtcgatgcagtggaggaccgttttgtgcttgatggcaac
atctgtacctgtggcggggcgtcgaccacattcgaactggcgctggaactgatcaagcgg
catcacagcccgatgttcgcgctcgaggtggcagccctgttcatgtatggcgacaagctg
gacatgcacgatccgcacaagcgcctgtcggcggatgccctggtgcgcagcgcgactgcg
ctgatgcggcggaccatcgaggcaccgatgccgattgaagatcttgcccggcagctgaag
gtggaccagcgtaccctggagcaccggttccagcgggaaatgtcgatgacgccactgggg
gtctacaaggcgatccgcctgcgcgaggcgcgccggcttgtggaattgaccatgctgggg
attgccgaaattgcagagcgttgcggctatcgcaacgcgagtgcaatgacccgggcctac
cggcaggaattcggccagtcgccgcgcgagcaccggcgacgcaggtag
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