Labrenzia sp. THAF35: FIU93_14655
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Entry
FIU93_14655 CDS
T06351
Symbol
ldc1
Name
(GenBank) Lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt00330
Arginine and proline metabolism
labt00480
Glutathione metabolism
labt01100
Metabolic pathways
labt01110
Biosynthesis of secondary metabolites
labt04148
Efferocytosis
Module
labt_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
FIU93_14655 (ldc1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
FIU93_14655 (ldc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
FIU93_14655 (ldc1)
Enzymes [BR:
labt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
FIU93_14655 (ldc1)
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Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QFT68026
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Position
3178741..3179961
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AA seq
406 aa
AA seq
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MERYKTAIDAALDLRPDQPVYCFRPDVLRHDAQQFQSLFPGKTAYAVKTNGEPFVLEALA
KAGISCFDVASPAEFAAVKEAAPKAEMLYMHPIKAQSDIRLALETYGIRTLSLDHEDEVA
KILRVVRALDIDPGTITLFVRIATKGHAAYELSKKFGAAPGHAVELLQRIDRIGFKCGLC
FHVGSQIEEPETYERALASADWIRSRAGVPVVELDVGGGFPAVYGHDPRRKAPEMPSLVE
LMGQLKADIADWQFDDLPLVAEPGRVIVARSISLIVRVLLKKGRRLYINDGIWASLSDSW
TGKITLPARFIPDPARKTRAGQPDKIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEI
GHIGAYSLSLRTRFNGFYPDKVIEVETPFDFGAAPEGFASIETMAD
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttataaaacagctattgacgccgccttggatcttcgtcccgatcagcctgtg
tattgtttccggccggacgtgctcaggcatgacgcacagcaattccagtcgctcttcccc
ggcaagacggcttacgcggtcaagacgaatggtgagccatttgtccttgaggcactggca
aaggccgggatcagttgtttcgatgtcgcatcgcctgcagagttcgccgcggtgaaagag
gcagcgccgaaggctgagatgctttacatgcatcctatcaaggcacagtcggacattcgg
ctagctttggaaacctacggtattcgaaccctttcgctcgaccacgaagacgaagtcgcg
aagatcctgcgtgttgttagggcccttgatatagatcctggaacgatcacactcttcgtt
cgtatcgccaccaaggggcatgctgcttacgagttgtcgaagaagtttggcgcggctcca
ggtcacgccgttgagttgctgcaacggatcgaccgtatcgggttcaaatgcggattgtgt
tttcacgttggaagccagatcgaagaaccggaaacctatgagcgagcgctggcttctgcc
gattggatcaggtcacgtgctggcgttcccgttgtggagcttgacgttgggggagggttt
ccggccgtttatggtcacgatccgcgccgcaaagcgcctgagatgccctcgctcgtggaa
ttgatggggcagttgaaagccgatatcgctgattggcaatttgatgacctgccgcttgtc
gccgagccaggcagagtgattgtggcccgatcgatctctctcattgtcagagtgctgttg
aagaaggggcggcgcctttacatcaatgatggcatctgggcgtctctttccgacagttgg
accggaaagataacgctgccggctcgtttcattccggacccggctcgcaaaacacgggct
ggtcagcccgacaagattgttcccttcaaggtctgcggcgcaacctgcgacagcgttgat
attctttccaggcctttctggctgccagagactgtcgacacgggagactggatcgagatt
ggccatatcggtgcctacagcttgtcgcttcgcacaaggttcaatggattttatcccgac
aaggtcattgaagtcgaaacgccgttcgatttcggtgctgcgccggaaggcttcgcttca
attgaaaccatggcggattga
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