Labrenzia sp. THAF35: FIU93_16110
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Entry
FIU93_16110 CDS
T06351
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD13
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt00061
Fatty acid biosynthesis
labt00071
Fatty acid degradation
labt01100
Metabolic pathways
labt01212
Fatty acid metabolism
labt02024
Quorum sensing
labt04146
Peroxisome
Module
labt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FIU93_16110
00071 Fatty acid degradation
FIU93_16110
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FIU93_16110
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU93_16110
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
labt01004
]
FIU93_16110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
labt04147
]
FIU93_16110
Enzymes [BR:
labt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FIU93_16110
Lipid biosynthesis proteins [BR:
labt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FIU93_16110
Exosome [BR:
labt04147
]
Exosomal proteins
Exosomal proteins of breast milk
FIU93_16110
Exosomal proteins of breast cancer cells
FIU93_16110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QFT68315
UniProt:
A0A9X7NND1
LinkDB
All DBs
Position
3488234..3489763
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AA seq
509 aa
AA seq
DB search
MNPAEWLYRSAARNPQSPALLQGTERKANYLEFARSAGAISAALAGYGIGKGDRVALFAA
NSTRYLEALYGIWWCGGAAVPINAKLHEKEAAWMVENSGAEFVFADKKTAELVAPYLPEG
VGLVSLDSPEFGALCQAAPHTTPEPLDPADLAWLFYTSGTTGRPKGVMLTCGNLASMALS
YFVDVDDVKPQDAILYAAPMSHGAGLYNFMHVMKGSRHVVPVSGGFDAAEILQIAPVIGS
ISMFAAPTMVRRLVDVAKASGGTGRGLRTIVYAGGPMYEADILEAVEVMGARFVQIYGQG
ECPMGITALPRAEVCDRSHPRWRERLNSVGTAQSVVRVAIVDGDGRELPHGEVGEIAVRG
DTVMKGYWRNEEATAQTIRDGWLWTGDVGRMDEDGYVTLQDRSKDVIISGGSNIYPREVE
EVLLTHPAVHEVAVVGRQDQEWGEIVVAFVACHPGQSVSEAELDKLCLDRIARFKRPKHY
HFPAALPKNNYGKILKTYLRQQLEAEETA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggcagaatggttataccggagcgcggcgagaaacccgcagagcccggcgctg
ctgcaggggaccgagcgcaaggcaaactatctggagtttgctcgtagtgccggggccata
agcgctgcgcttgccggctacggcatcggcaagggagacagggtcgcactgtttgccgca
aattccacgcgctatctggaagcgctttacggcatctggtggtgtggcggcgcagccgtg
ccgataaacgccaagctgcacgaaaaggaagccgcctggatggtggaaaattccggtgca
gaatttgtgttcgccgacaaaaagaccgccgagctggtggcgccatatctgccggagggt
gtgggtcttgtctcgctcgacagccctgaattcggcgccctatgccaggcagcgccgcac
accacgccggaacctctggatcctgcagatcttgcctggcttttctatacctccggcacc
accggcaggcccaagggcgtgatgctgacttgcggcaatcttgcttcgatggcgctgagc
tactttgtcgatgtcgatgacgtcaagccgcaggatgcaatcctctatgccgcgccgatg
agccatggtgccgggctctacaatttcatgcacgtgatgaaagggtcgcgtcacgtcgtg
ccggtcagcggcgggtttgatgccgccgaaatccttcagatcgcgcctgtgatcggctcc
atctccatgtttgccgcgcccaccatggtccgccgcctggtggatgtcgccaaggcttcg
gggggcactggccgggggctgcggaccatcgtctatgccggcgggcctatgtacgaggcg
gacattctggaagcggttgaagtgatgggcgcacggttcgtgcagatctacggtcagggc
gaatgcccgatgggcatcaccgcactgccgcgcgccgaagtttgtgaccgcagccatcca
cgttggcgcgagaggctgaattccgtcggcacggcccagtccgtcgtgcgggttgcgatc
gtcgacggtgatggccgggagctgccccacggcgaagtcggggaaattgccgtgcgcgga
gatacggtgatgaagggctactggcgaaacgaggaagcaacagcccagaccatccgtgat
ggctggctgtggaccggagacgttggtcgcatggatgaggacggctacgtcacgctgcag
gatcggtccaaggacgtcatcatttccggtggctccaatatctacccgcgcgaagtcgaa
gaggtgctgctgacacacccggctgtgcacgaggtggcagtcgttggccggcaggaccag
gagtggggtgagatcgttgtcgcctttgttgcctgtcacccgggccagagcgtgagtgag
gctgagctcgacaagctctgtctggaccggatcgcccggttcaagcggccgaaacactat
catttcccggctgccctgccgaaaaacaactacggcaagatcctgaaaacgtacctgaga
caacagctcgaagcggaggaaacggcatga
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