Labrenzia sp. THAF35: FIU93_16630
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Entry
FIU93_16630 CDS
T06351
Symbol
lsrB1
Name
(GenBank) Autoinducer 2-binding protein LsrB precursor
KO
K10559
rhamnose transport system substrate-binding protein
Organism
labt
Labrenzia sp. THAF35
Pathway
labt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FIU93_16630 (lsrB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labt02000
]
FIU93_16630 (lsrB1)
Transporters [BR:
labt02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
FIU93_16630 (lsrB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
QFT68419
UniProt:
A0A9X7NPG9
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All DBs
Position
3600330..3601322
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AA seq
330 aa
AA seq
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MKLLKSLLAATAVAAVCIAAPASAAEKRIALVVKALGIGFFEAAAKGAEEAAKELGDVEI
IYTGPTDTTAEGQIEVINALIAQKVDAIAISANDQDALVPALKKAMDRGITVISWDSGVA
PEGRQLHLNPSSNPLIGNMIIKLAADHLPDGGDVAVLSASATATNQNIWIEEMNKVKDNY
PGINVVATVYGDDLADKSYREAQGLMQTYPDLKAIIAPTSVGIVAAAQAVSDAEKAGQIN
VTGLGLPSEMAGHLASGASKSFAIWNPIDLGYSATMLAYNLSTGAAEAKPGAEIPMGRMG
TLTLNDSNEGAMADPFVYDSSNIDDFKDIF
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgctcaagtcacttctggcggcaacagcagtcgccgccgtctgcatcgccgca
ccggccagtgccgcggaaaaacgcatcgcccttgtcgtcaaggcactcggcatcggcttc
tttgaagctgccgccaagggcgctgaagaggccgccaaggaactcggtgatgtcgagatc
atctacaccggcccgaccgacacgaccgcagaaggtcagatcgaggtcatcaacgcgctg
atcgcccagaaagtggatgccattgcaatctccgccaacgatcaggacgccctggttccg
gcactgaagaaagccatggaccgcggcattaccgtgatttcctgggacagcggcgttgcg
ccggaaggtcgccagcttcacctcaatccgtcgtccaatccgctgatcggcaacatgatc
atcaagctggcagccgatcatctgcccgatggcggtgatgtcgccgtcctgtctgcgtcc
gcaaccgccacgaaccagaacatctggatcgaggaaatgaacaaggtgaaggacaattat
ccgggcatcaacgtggtcgcgaccgtttatggtgatgaccttgccgacaagtcctaccgt
gaagcccagggcctgatgcagacctatccggacctgaaggcgatcatcgcgccgacgtcc
gtgggtatcgttgcggccgctcaggcggtctccgacgccgaaaaagccggtcagatcaac
gtgaccgggctcggcctgccgtcagaaatggctggccacctcgcgtccggtgcatccaag
tcgttcgccatctggaacccgatcgatctcggctattcggcaaccatgctggcttacaac
ctgtccaccggcgccgcggaagcaaagccgggtgcggaaatcccgatgggacgtatgggc
acgctgacgctcaacgacagcaacgaaggcgcgatggcggacccgttcgtctatgacagc
tccaacatcgacgacttcaaggacattttctaa
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