Labrenzia sp. THAF35: FIU93_17275
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Entry
FIU93_17275 CDS
T06351
Name
(GenBank) Tripartite ATP-independent periplasmic transporter, DctQ component
KO
K11689
TRAP-type transport system small permease protein
Organism
labt
Labrenzia sp. THAF35
Pathway
labt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FIU93_17275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labt02000
]
FIU93_17275
Transporters [BR:
labt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FIU93_17275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctQ
DUF745
Exonuc_VII_L
Iron_permease
CCDC39
CHD5
SpoIIIAH
Motif
Other DBs
NCBI-ProteinID:
QFT68548
LinkDB
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Position
complement(3736884..3738218)
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AA seq
444 aa
AA seq
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MPHLDFTLPHWAYWLGLIIFPLIAAALAKRPKPTERRYSLVLGYFILVTGGILGLHRLYL
KSLIGLVYIPVFVLILYANAQSQDARAVVSDMANAVRQAERTLEREGERVKTAEADLPAL
RQKLAEAEAQAEEGSFAKRRAERDVQRAEQRVEQGKARVAEAEATLETARPAAVTARETL
DFWGNVAKYAFWLLLAGVAVDALLLPRLVSKANENLPPDPELSEAEKKLKELEEAERKDD
ADHVSSGWTGWIDRLSLYCGEFVSYWAVIAVLVYYFEVMSRYVFGSPTNWAHEAMYLMFG
MQYLIAGSYAMLTESHVRVDVFYAPLSPRRKAIVDLLTSVFFFIFAGTLLVTSWIFAFDA
IAVPSGNSLVSDWARGEIGFSDVVASWNLAQWTDPNIRWGEISFNEWEVPLWPMKWVMVL
GGLLLVLQGISKFAQDIRAVMGRA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatctggactttaccctgccgcattgggcctattggctggggctgatcatcttt
ccgctgatcgccgctgcccttgccaagcggccgaagccgactgaacggcgctactcgctg
gtgctcggctatttcattctcgtcaccggcggcatcctgggcctgcatcggctttacctg
aaaagcctgatcggcctggtctatatcccggtgttcgtgctgatcctctacgccaacgca
caaagccaggatgcgcgcgcggttgtctcggatatggccaacgcagtgcgacaggcggag
cggacgctcgagcgcgaaggcgaaagggtgaagaccgcagaggccgatcttcctgccttg
cgccaaaagctcgccgaggcggaagcgcaggccgaagaaggcagctttgccaagcgccgc
gcggaacgggatgtccagcgcgccgaacaacgtgtcgaacagggcaaggcccgggtggcc
gaggccgaagcaactctggagaccgcccgcccagctgccgtaacagctcgcgaaaccctc
gatttctggggcaatgttgccaagtacgccttctggctcctgcttgcaggtgtggcggtc
gacgcactcctcctgccccggctggtttccaaagcgaacgaaaacctgccaccggacccg
gaactcagcgaggcggaaaagaagctcaaggagcttgaagaagccgagcgcaaggacgat
gcggatcacgtctcttccggctggaccggctggattgaccggctctcgctctactgtggc
gagtttgtcagctactgggcggtgatcgccgttcttgtctactacttcgaggtcatgagc
cgctacgtcttcggcagcccgaccaactgggctcacgaggcgatgtacctcatgttcggc
atgcagtacctgatcgccggttcctacgccatgctgacggaatcccacgtacgggtcgat
gtcttctatgcgccgctgtcgccgcgccgcaaggcaattgtcgatctgcttacatccgtc
ttcttcttcatcttcgccggcaccctgctggtgacttcgtggatcttcgccttcgatgcc
atcgcggttccctccggcaactcgctggtatctgactgggcgcgcggtgaaatcggcttc
agcgatgtcgttgcaagctggaacctggcccaatggaccgatccgaacatccgctggggc
gaaatcagcttcaacgaatgggaagtgccgctctggccaatgaagtgggtcatggtgctc
ggcggtttgctgctggtgctccagggaatttccaaattcgcgcaggacatccgcgcagtg
atgggcagggcttga
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