Labrenzia sp. THAF35: FIU93_18280
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Entry
FIU93_18280 CDS
T06351
Symbol
oppD3
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
K02034
peptide/nickel transport system permease protein
Organism
labt
Labrenzia sp. THAF35
Pathway
labt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU93_18280 (oppD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labt02000
]
FIU93_18280 (oppD3)
Transporters [BR:
labt02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FIU93_18280 (oppD3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
ABC_tran
oligo_HPY
AAA_21
OppC_N
AAA_16
SMC_N
Motif
Other DBs
NCBI-ProteinID:
QFT68747
UniProt:
A0A9X7NPE9
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Position
complement(3958867..3960804)
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AA seq
645 aa
AA seq
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MSDTTMSAPSKEKAKSSRPGTLALLLNNSLATSGLVVLVLICLIALAAPILPLANPDVTA
PADRLLPVLTEGHLLGTDHLGRDILSRLIWGTRISLAVGLSATIIAAFFGSLLGLVAGYA
GGRTDTLIMRGIDMVMAFPYILLALAIVAVLGPGLLNALYAIALVNIPFFARNIRGITLG
LSRREYVDAARLSGKSPVQILFLEILPNVLPVIVITMSTTVGWMILETAGLSFLGLGAQP
PQADLGSMLGEGRKILFTAPHVSIIPGLMIFALVMSINLFGDGVRDILDPRLRAGSLTRP
VSRTAVHRKADEIPAPSEKGGVLDVRQMRTEFQIGSSVYKAVGGVDLNLKEGECLGVVGE
SGSGKSVTAMSIMGLVPTPPGRIAGGAAYLDGEDLFAASDRRIRDLRGGSVAYVFQDPLS
TLHPLFTVGDQLTEAITTHQPMSGSKAREKAVELLSLVRIPNAKERLSAYPHELSGGMRQ
RVCIAMALANDAKVLIADEPTTALDVTVQSQILTLMNGLRRERNAAILFITHDFGVVSAL
CDRVAVMYAGRIVETGTTEEVLANPRHPYTAKLIECVPVLGEPDRRLDAIEGRPPVVNNL
PDGCAFAERCPHAQTSCRTGEIKLEMSSETRGVRCLFPLNSGATA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacgaccatgagcgccccttccaaggagaaggcaaagtcctcgcgcccggga
acacttgcgcttctgctcaacaattcgctggcaaccagcggccttgtcgttctggtgctg
atctgtcttatcgctctggcagcgccgatcctgccgctggcgaacccggacgttaccgcc
ccggcagaccgtcttctgccggtccttaccgaaggacacctgcttggcaccgatcacttg
ggcagggacatcctttcgcggctgatctgggggacacgcatatcgcttgccgtcggtctg
tcggcaacaataatcgctgccttcttcggctcgcttctgggactggtcgccggatacgcc
ggcggtcgtacagacactctgatcatgcgcggcatcgatatggtgatggcgtttccctac
attctgttggcactggccatcgtcgccgtgcttggccctgggctgctcaacgcgctttac
gccatcgcgctcgtcaacataccgttctttgcccgcaacattcgcggtattacgctcggg
ctatcccgaagagagtatgttgatgcggcacggctgtccggcaagtcgccggtacaaatt
ctgtttctggaaattctgcccaacgtcttgccggtcatcgtcatcaccatgtcgacgacc
gtcggctggatgatcctcgaaacggccggcctgtccttcctcggcctgggtgcccagccg
ccacaggcagaccttggctccatgctgggtgaaggccgcaagatcctcttcactgcgccg
catgtctccatcattccgggcctgatgatctttgcgctggtcatgagtatcaacctcttc
ggtgacggtgttcgcgatatcctcgacccgcgcctgcgtgccgggtccctcacccggccg
gtctctcgaacagcggtgcatcgcaaggcagacgagatccccgcgccttcggaaaagggc
ggtgtgctggatgtccgtcagatgcgcaccgaattccagatcggcagctccgtttacaag
gcagtcggcggtgttgatctgaacctgaaagagggcgaatgcctgggcgttgtcggagaa
tccggatccggcaagtcggtaacggccatgtccatcatgggccttgtgccgacaccaccc
ggccggattgccggcggtgccgcctatctcgacggcgaagatctttttgcggcaagcgac
cggcgtatccgggacctcagaggcggttcggttgcctatgtcttccaggatccgctgtcg
acgctgcacccgctcttcaccgttggtgatcagttgacggaagcgatcaccacccaccag
cccatgtccggctcgaaagcacgggagaaggccgttgaactgctttcgcttgtgcggatc
ccgaatgcgaaggaacgattgtccgcctacccgcacgagctttccggtggcatgcgccaa
agggtctgcattgccatggcgctcgccaacgatgccaaggtgctgattgcggacgagccg
accaccgcgctcgacgtcaccgtgcaatcgcaaatcctgacgctgatgaacggcctgcgc
cgcgaacgaaatgctgcaatcctgttcatcacccatgatttcggcgttgtctccgccctt
tgtgaccgtgttgcggtgatgtatgcgggccggatcgtcgaaacgggaacgacggaggag
gttctggcgaacccgcgtcatccctacaccgccaagctgatcgaatgcgtgcctgttctg
ggcgagccggaccgtcgtctggatgcaatcgagggccgcccgcccgtggtcaataacctg
ccggacggttgtgccttcgccgaacggtgtccgcacgcacagacctcctgccggaccggc
gagatcaagcttgagatgtcttccgaaacccgcggtgtgcgctgcctctttccgctgaat
tccggagcgaccgcatga
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