Labrenzia sp. THAF35: FIU93_21000
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Entry
FIU93_21000 CDS
T06351
Symbol
valS
Name
(GenBank) Valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FIU93_21000 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
labt01007
]
FIU93_21000 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
labt03016
]
FIU93_21000 (valS)
Enzymes [BR:
labt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
FIU93_21000 (valS)
Amino acid related enzymes [BR:
labt01007
]
Aminoacyl-tRNA synthetase
Class I (U)
FIU93_21000 (valS)
Transfer RNA biogenesis [BR:
labt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FIU93_21000 (valS)
Prokaryotic type
FIU93_21000 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1_2
ABC_tran_CTD
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
QFT69279
LinkDB
All DBs
Position
complement(4548382..4551312)
Genome browser
AA seq
976 aa
AA seq
DB search
MLDKTYDAASVEPRIYETWEKAEAFKAGAGAKEGAASFSIVIPPPNVNGSLHMGHALNNT
LQDILIRWKRMQGFDTLWQPGTDHAGIALQIAVERQMAERNEPSRTEIGREAFVQRAWRY
KGEVGSAIIAQLKRLGASCDWSRERFTMDEGLSEAVRKVFVDLYNEGLIYKSKRLVNWDP
KMETAISDLEVENIETDGHMWHFRYPLAGGATYEYVEKDEEGNITLRETRDYISIATTRP
ETMLGDGAVAVHPDDERYKPIVGKLCEIPVGPKEHRRLIPIITDEYPDPDFGSGAVKITG
AHDFNDYGVAQRNKIPMYRLMDTKGAMRADGAPYVEEAAKAQAIIDGAEMTIQEVDLINI
VPDDLRGLDRFEARKRVIEQITAEGLAVTAPADHPDVAWMKGQAPEWNTLGRAVVRPLEE
GAEAPERLPLVESKKIMQPFGDRSKVVIEPMLTDQWFVDAKTLAAPALKAVQDGTTKLIP
GNADKVYFNWLNDIQPWCISRQLWWGHQIPVWYDEDGKEYCAHSEEEAVAMAGGKALTRD
EDVLDTWFSSALWPFSTLGWPHKTPELERYYKTDVLITGLDIIFFWVARMMMQGIHFMDE
VPFHTVYFNSIVVDGKGKKMSKSTGNVIDPLDLIGRFGADATRFALASQEVQARRMLRMS
DQAAEGGQRFATKLWNAARFAEMNGCARMEGFDPAATKHTLNRWIATEASRCIAEVTAAL
EDFRFNDASGAAYRFTWNTFCDWYLELAKPIFNGDDEAAKAETRATAAWALDEILKVLHP
IMPFLTEELWERLGDEGNAHDGLLMLTAWPEPKVSDEAAAGEINWLVDLISEIRSVRAEM
NIPAGAKVSVVVAGASEQTKARLKTHESAILRLARAETVSLADAAPSGAAQIIVGEATVC
LPLAGVIDLGAEKTRLQKEAGKLEGEISKIEKKLSNPAFVAKAPEEVVDGEREKVAESKE
KLEKVQTALGRLAEIG
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgctggataagacctacgatgcggccagcgttgagccgcggatttacgaaacctgggaa
aaggcggaggccttcaaggccggagctggtgccaaagagggtgcagcctccttttccatc
gtaattccgccgccgaacgtgaacggttcgctgcacatggggcatgctctcaacaacacg
cttcaggacatcctgatccgctggaagcgcatgcagggcttcgatactctttggcagccg
ggcaccgaccatgcggggatcgcgcttcagatcgctgtcgaaagacagatggccgaacgc
aacgagccgagccgcacagagatcggccgcgaggcattcgtacagcgtgcgtggcgctac
aagggagaagtcggcagcgcgattatcgctcagctcaagcgtctgggcgcatcatgcgac
tggtcgcgtgaacggttcaccatggacgagggcctgtcggaggccgtccgcaaggttttt
gtcgacctctacaacgagggcctgatctacaagtccaagcggctcgtcaactgggatccg
aagatggagacagccatttcggatctcgaggtcgagaacatcgaaaccgatggacacatg
tggcacttccgctacccgctggccggtggcgcgacctatgaatacgttgagaaagacgaa
gaggggaacatcacccttcgcgagacccgtgactatatttcgattgccacgacgcggccg
gaaaccatgctgggtgacggtgccgttgccgttcatccggacgatgagcgttacaagcca
attgtcggcaaactctgcgaaatcccggtcgggccgaaggaacatcgtcgtctgatcccg
atcatcaccgacgaatatccggatccggatttcggctcgggggcggtcaagatcacaggt
gcacatgacttcaacgactatggtgttgctcagcgcaacaagatccctatgtaccgcctg
atggacaccaagggtgcgatgcgcgccgacggtgcgccttatgtcgaagaggctgccaag
gcccaggcgatcatcgatggcgcagagatgaccattcaagaggtcgatctcatcaacatc
gttccggacgatctgcgtggacttgaccggttcgaggcgcgcaaacgcgttatcgaacag
atcacggcggaaggtctggcagttacggcgccggcggatcatccggacgttgcctggatg
aaggggcaggcccctgaatggaacacgcttggccgggccgtcgttcgtccgctggaggaa
ggcgcggaagcgccggagcggttgccgctggtcgagtccaagaagatcatgcagccgttc
ggagaccgctccaaggtggtcatagagcctatgctgacggaccaatggtttgtcgatgcc
aagacactggcggctcccgccttgaaagccgttcaggacggcacgaccaagctcattccc
ggcaacgccgacaaggtctatttcaactggctcaacgacattcagccctggtgtatttcc
cgccagctctggtggggccatcagatccctgtctggtacgatgaagatggcaaggaatac
tgcgcacattccgaggaagaggccgttgcaatggcaggcggcaaggcgctgacgcgggac
gaggacgtcctggacacgtggttctcctctgcgctctggccgttttcgacgcttggttgg
ccacacaagacgccggaactcgagcgctactacaagacggatgtgctcatcacgggtctc
gacatcatcttcttctgggttgcccggatgatgatgcagggcattcatttcatggacgaa
gtgccgttccacacggtttacttcaactcgatcgttgttgacggcaagggcaagaaaatg
tccaagtcgaccggaaacgtgatcgatcctctcgatctgatcggccgtttcggcgccgat
gccacccggtttgcgcttgcgagccaggaggttcaggcccgcagaatgcttcggatgtcc
gaccaggcagccgaaggcggtcagcgctttgccaccaaactctggaacgctgcccggttc
gccgaaatgaacggctgtgcccggatggaagggttcgacccggcagcaaccaagcacacg
ctcaaccgttggatcgcaacggaagcaagccgctgtatcgccgaggtgaccgcggcactc
gaggacttccggttcaacgatgcatccggtgctgcctatcggttcacctggaacacgttc
tgcgactggtacctggaactcgcaaagccgatcttcaacggtgatgatgaagctgccaag
gctgaaacccgggcaacggcagcatgggcgttggacgaaatcctgaaggtcctgcatccg
atcatgccgttcctgacggaagaactgtgggagcgtctcggagacgaaggcaacgcgcat
gatggcttgctgatgctgactgcctggccggagcccaaggtttccgatgaggctgcggct
ggtgagatcaactggcttgtcgatctgatttccgaaatcagatcggttcgcgcggaaatg
aacattccggcaggtgcgaaggtctcggtggtcgtcgcaggggccagtgaacagaccaag
gcccggctcaagacccacgagtctgccattcttcgtctggcaagggcagagaccgtttcc
ctggctgatgcagctccctccggagcggcccagattattgttggcgaagccacggtctgt
ctgccactcgccggggtcatcgaccttggtgcagaaaagacccgacttcagaaggaagcc
ggcaagctggaaggtgagatctcgaagatcgagaagaagctttccaacccggcattcgtt
gccaaggcccccgaagaggttgttgacggcgaacgcgaaaaagttgccgaatccaaggaa
aagctggagaaggtccagacggcgctcggtcgtctggcggaaatcggctag
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