Labrenzia sp. THAF35: FIU93_23570
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Entry
FIU93_23570 CDS
T06351
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FIU93_23570 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
labt01007
]
FIU93_23570 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
labt03016
]
FIU93_23570 (aspS)
03029 Mitochondrial biogenesis [BR:
labt03029
]
FIU93_23570 (aspS)
Enzymes [BR:
labt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FIU93_23570 (aspS)
Amino acid related enzymes [BR:
labt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FIU93_23570 (aspS)
Transfer RNA biogenesis [BR:
labt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FIU93_23570 (aspS)
Prokaryotic type
Other AARSs
FIU93_23570 (aspS)
Mitochondrial biogenesis [BR:
labt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FIU93_23570 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QFT69785
UniProt:
A0A9X7NR42
LinkDB
All DBs
Position
complement(5054581..5056362)
Genome browser
AA seq
593 aa
AA seq
DB search
MHPYRSHTCGDLRLSDEGQTIRLSGWVHRVRDHGGVLFIDLRDHYGVTQCVVDPDSAAFK
LAETVRSEWCIRIDGNVKKRTDETINAELPTGDIEVFIREMEILGAAKELPLPVFGDLDY
PEEVRLKYRFLDLRREKLHQNMILRSNVVRDLRDRMWNIGFNEFQTPIITASSPEGARDF
LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME
MSFVTQQDVFDTIEPVIAGCFERFGNGRPVNRDWPQISYKDSALWYGTDKPDLRNPIKME
IVSEHFAGSGFAIFAKLLEQPGTEIRAIPAPKGGSRKFCDRMNKFAQEQGLPGMGYIFWR
KAEDGSMEAAGPLAKNIGPERTEAIRTQLGLDVGDAAFFLGGKPKQFEPVAGKARVIIGE
ELGHTDKDRFEFAWIVDFPIYERDEETGEIDFSHNPFSMPQGGMEALEGDPLEVLGYQYD
LACNGHELISGAIRNHKPEVMYKAFEIAGYPAEEVDKRFGGMVNAFQYGAPPHGGCAAGI
DRMVMLMADEANIREVMLFPMNQKAEDLMMGAPSEATSAQLRDLHLRLNLPDA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcacccctaccgtagtcacacatgcggtgacctccgtctgtccgacgaaggccagact
atccgtctttccggctgggtccacagggtccgcgatcatggcggggtgctgttcatcgat
ctgcgcgatcactacggtgtcacccagtgcgtggtcgaccccgactctgcggccttcaaa
ctggccgaaaccgtgcgttccgaatggtgtatccgcatcgacggcaacgtgaagaagcgc
actgacgaaaccatcaacgccgaacttccgaccggtgacattgaagtcttcatccgcgag
atggaaatcctgggtgcggcgaaggaactgccgctgccggtcttcggtgacctggactat
ccggaagaagttcgtctgaagtaccgtttcctggatctgcgccgcgagaagctgcaccag
aacatgatcctgcgctccaacgtggtgcgcgatctgcgtgaccgcatgtggaacatcggc
ttcaacgaattccagacgccgatcatcacggcatcttcccctgagggcgcgcgtgacttc
ctggttccgtctcgtctgcaccccggcaagttctacgccctgccgcaggccccgcagcag
ttcaaacagctgctgatggtctcgggcttcgacaagtacttccagatcgcgccgtgtttc
cgcgatgaagacccgcgtgccgatcgttcaccgaccgacttctaccagctcgacatggaa
atgtccttcgtcacccagcaggacgtgttcgataccatcgagccggtgattgcaggctgc
ttcgagcgtttcggcaacggccgtccggtcaaccgcgactggccgcagatttcctacaag
gattcagcgctctggtacggcaccgacaagccggacctcagaaacccgatcaagatggaa
atcgtctccgagcattttgcaggatccggttttgcaatctttgccaagctgctggagcag
ccgggcaccgagatccgcgctatcccggcaccgaagggtggaagccgcaagttctgcgac
cgcatgaacaagttcgcccaggagcagggcctgccgggcatgggctacatcttctggcgc
aaggctgaagacggttccatggaagctgccggtccgctggccaagaacattggtccggaa
cgcaccgaagcgatccgcacccagctgggtctcgacgtcggtgatgcggccttcttcctc
ggcggcaagccgaagcagttcgagccggtcgcaggcaaggcccgtgtcatcatcggcgaa
gagctcggccataccgacaaggaccggttcgaatttgcctggatcgtggatttcccgatc
tacgagcgcgacgaggaaaccggcgagattgatttctcgcacaacccgttctccatgcct
cagggcggaatggaggcattggaaggcgatcctctggaagtattgggttaccaatacgat
ctggcctgcaacggccacgaactgatttcaggcgcgatccgaaaccacaagcctgaggta
atgtacaaggctttcgagatcgccggctatccggctgaggaagtcgacaagcgcttcggc
ggcatggtcaatgcattccagtatggcgctcctccgcatggcggctgcgcggccggcatc
gaccgcatggtcatgctgatggctgatgaagccaacatccgtgaagtcatgctcttcccg
atgaaccagaaggcggaagacctgatgatgggcgcaccgagcgaagcgacatcggctcag
cttcgcgatctgcatttgcgtctgaacttgccggacgcctga
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