Labrenzia sp. THAF35: FIU93_24775
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Entry
FIU93_24775 CDS
T06351
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FIU93_24775 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
labt03021
]
FIU93_24775 (rpoZ)
03400 DNA repair and recombination proteins [BR:
labt03400
]
FIU93_24775 (rpoZ)
Enzymes [BR:
labt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FIU93_24775 (rpoZ)
Transcription machinery [BR:
labt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FIU93_24775 (rpoZ)
DNA repair and recombination proteins [BR:
labt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FIU93_24775 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Bse634I
Motif
Other DBs
NCBI-ProteinID:
QFT70024
UniProt:
A0A9X7NSJ9
LinkDB
All DBs
Position
5304395..5304796
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AA seq
133 aa
AA seq
DB search
MARVTVEDCIDKVENRFELVLLAAHRARMISSGSPLTIDRDNDKNPVVALREIAEQTVSP
EDMKEDLIHSLQKYVEVDEPEAEAVPMVPSSNQHQMTQVNNVDDSAVEFDRMSEEDLLRG
LEGLVPPERTDDV
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgtgaccgtcgaggactgcatcgacaaggtcgaaaaccggtttgagctggtg
ctgcttgctgcgcatcgcgctcgcatgatctcgagcggctcgccgctgaccattgaccgt
gacaacgacaagaaccccgttgttgcgctgcgcgagattgccgagcagaccgtcagcccg
gaagacatgaaagaggacctgatccactcgctgcagaaatatgtggaagtggatgagccc
gaggccgaagccgtgccgatggttccgtcctcgaaccagcatcagatgacgcaggtcaac
aacgttgacgacagcgcggtcgaattcgaccgcatgtcggaagaagaccttctgcgcggc
ctcgaaggcctcgttccgccggagcggaccgacgacgtctga
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