Labrenzia sp. THAF35: FIU93_30960
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Entry
FIU93_30960 CDS
T06351
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt00071
Fatty acid degradation
labt00362
Benzoate degradation
labt00650
Butanoate metabolism
labt01100
Metabolic pathways
labt01120
Microbial metabolism in diverse environments
labt01200
Carbon metabolism
labt01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
FIU93_30960 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
FIU93_30960 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FIU93_30960 (fadB)
Enzymes [BR:
labt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FIU93_30960 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_8
FAD_binding_3
Pyr_redox
Pyr_redox_2
PALP
TrkA_N
NAD_binding_2
F420_oxidored
ApbA
Pyr_redox_3
Thi4
NAD_binding_7
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
QFT71251
UniProt:
A0A9X7RJU6
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All DBs
Position
pTHAF35_b:76486..78561
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AA seq
691 aa
AA seq
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MPVDLALSGGTAILTIDNPPLNLLSAEIRAGLLHGMDAAVAQGANRLIVTGAGTTFVAGA
DAKEFGLPPTAPHLNDVLLHLSRLPIPTIAAINGAAFGGGLEIALACRYRIAAPGAQLGL
PEVVLGIVPGAGGTQRLPRLIGVKAALDMIVNGKPIAAGKALSVGLVDQLADDPVAAALA
LDGTILATAQGPDQRPAPLADDAAVAAMQAQAQRRMPGQIAPPVAVSLVAATASLPLAEG
LARERAAFLELRASPQARALRHVFFAERAAGNRGRDYPKPARDIATAIVVGGGNMGASIA
YALATAGISVTVVERDAAAAGRAEGNLRKLVDHGIGRGTLSASEGAAILDRLTAVVGYAN
LPPADLAIEAAFEDFAVKRAIFAELEAALPPETILATNTSYLDVNRLADDLLNPSRFLGL
HFFSPAHVMKLLEIVKGDRTAPETLGAAFALARRLGKIPVLSGVCDGFIGNRILTRYRRE
ANLLLAEGALPAQVDAAMQGFGMAMGPFAAQDLSGLDIAYANLRRQDAAADPRHVPLVER
LVEDYQRLGRKTGAGWYDYGPDGKSAVSALVTEEIRKVSTRLGNARRNFTADEIVERITL
AMIAEACAILEEGIAERPQDIDLVLVHGYGFPRWRGGLIHHADSLGVSALVARYGALAAA
DPHGWSVPPLLARLAAQGLTLDSLNAADGRG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgatcttgcactgagcggtggcaccgccatcctgaccatagacaacccgccg
ctgaacctgctgagtgccgaaattcgggcgggccttctgcacgggatggacgcggcggta
gcgcagggcgcgaaccggctgatcgtgaccggggcaggcacgacctttgtcgccggggcg
gatgccaaggagttcggtctgcctccgactgcaccgcacctgaacgacgtgctcttgcac
ctctcacggcttcccatcccgaccattgccgcgatcaatggcgccgcatttggtggcggg
ctggagattgcgttggcctgtcgctatcgcatcgccgcacccggcgcgcagctgggattg
cccgaggtggttctgggcatcgtgccgggcgcggggggcacgcaacggcttccacggctg
atcggggtcaaggctgcgctggacatgatcgtgaacggcaagcccatcgcggcgggcaag
gcattgtcggtggggctggtcgatcagcttgccgacgacccggtggcggcggcactggcg
ctggacggcaccatccttgccacggcgcaggggccggaccagcggcccgcgccgctggcc
gatgacgcggccgtggcggcgatgcaggcgcaggcgcagcggcggatgccgggccagatc
gccccgccagtcgcggtgagtctggttgcggcaacggccagtctgcccctcgccgaaggg
ctggcgcgagaacgcgcggcgtttctggagttgcgcgcctcgccgcaggcgcgggcgctg
cggcatgtgttctttgccgaacgggcggcgggcaatagggggcgagactatcccaagccc
gcgcgggacatcgcgactgccattgtggttggcggcggcaacatgggggcctccatcgcc
tatgcgctggcgaccgcgggcatttccgtgacagtcgtcgaacgcgatgcggcggcggcg
gggcgggccgagggaaacctgcgcaagctggttgaccatggtatcggtcgaggcacgctt
tccgcctccgagggcgcggcgatcctggaccggctgaccgccgttgtcggttatgccaac
ctgccgcccgccgatctggccatcgaggcggccttcgaggatttcgcggtcaagcgcgcg
atctttgccgaacttgaagccgccctgccgccagagacgatcctggccaccaacacctcc
taccttgacgtgaaccggctggccgatgaccttctgaacccgtcgcgctttctcggcctg
catttcttcagcccggcgcatgtgatgaagctgctggagatcgtgaagggggatcgcacc
gcgcccgaaacgctgggcgcggccttcgcgctggcgcggcgcttgggcaagatcccggtc
ctgtcgggggtgtgcgacgggtttatcggcaaccgtatcctgacgcgctaccggcgcgaa
gcgaacctgctactggcggaaggcgcgctgcccgcccaggtcgatgccgcgatgcagggc
ttcggcatggcgatgggtccctttgcggcgcaggacctgtccggtcttgacatcgcttac
gccaatctcaggcggcaggacgcggccgcagacccgcgccacgtgcccctggtcgagcgg
ctggtcgaggattaccagcggcttggccgcaagaccggcgcggggtggtatgactatgga
cccgatggcaagtccgccgtgtcagcccttgtaacggaggaaatccgtaaggtctcgacc
cgactgggcaatgcccggcgcaacttcacagccgacgagatcgtcgaacggatcaccctt
gcgatgatcgccgaggcctgcgcgatcctcgaggaaggcatcgccgagcgacctcaggac
atcgaccttgtgctggttcatggctacggctttccgcgctggcgcggcgggctgatccat
catgccgacagccttggggtgagcgccctggtggcgcgctatggggcgctggccgcagcc
gatccgcatggctggtcggtgccgccgctgctggcgcggcttgcggcacagggtctgacc
ctggacagcctgaacgccgccgatggccgcggctga
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