Lactobacillus acidophilus NCFM: LBA0006
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Entry
LBA0006 CDS
T00231
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lac
Lactobacillus acidophilus NCFM
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lac03032
]
LBA0006 (gyrA)
03400 DNA repair and recombination proteins [BR:
lac03400
]
LBA0006 (gyrA)
Enzymes [BR:
lac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LBA0006 (gyrA)
DNA replication proteins [BR:
lac03032
]
Prokaryotic type
DNA Topoisomerases
LBA0006 (gyrA)
DNA repair and recombination proteins [BR:
lac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBA0006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Glycolipid_bind
Motif
Other DBs
NCBI-ProteinID:
AAV41914
UniProt:
Q5FN10
LinkDB
All DBs
Position
6258..8732
Genome browser
AA seq
824 aa
AA seq
DB search
MDENQTQDHRIRNVDLTGMMRSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMSELGV
TPDKPYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDEP
AAMRYTEARMSKIAVEMLRDINKNTIDWQRNYDDTESEPVVLPARIPNLLVNGANGIAVG
MTTNIPPHNLSEVISGLHMLMRNPDATTKDLMKEIPGPDFPTGGIIMGRGGIYRAYESGK
GNIVVRAKTNIETEKSGRERIIVSEIPFMVNKAELVKKIADLAREKVIDGITGVRDESDQ
TGMRITIDIRRDASASVVLNNLFKQTQMQANFGMNMVAIVDGAPHYLTLKQMLQYYLDHQ
EDVVTRRTKFELAKAEARAHILEGLRIALDNIDEIVHIIRSSHSSDIAKATLISRFGLDD
KQSQAILDMRLVRLTGLERDKVEAEYQELQAKIADYKDILAKPERIDQIIYDELLDIQKR
FGDERRTEIGASEVVSIEDEDLIEKQNILLTVTHNGYIKRMPIQEFKTQNRGGKGIKGMG
VQDGDFIEHLIYSSTHDMLLFFTNAGKVYSKKAYEIPEYGRMAKGLPIVNLLQLEKGEKV
QAVVNIPEGADDNYLFFVTKMGTVKRTHVSEFANIRNSGLIALTLRDGDELSNVLTTDGN
QNILIGTHLGYAVTFNESDVRAMGRTAAGVRGINLRPEDYVVGSGVLGANDQVLVISEKG
YGKRTPASEYPVKGRGGKGIKTANITEKNGPLAGVIVLDSDEDIMVITTDGIMIRFKTAD
VSQTSRSTIGVRLIKVNDDSRVASLTIVPTEAEQDEIGDEDSEK
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaatcaaactcaagatcatagaattagaaatgtcgatctaactggcatgatg
cgtagttctttcttggattatgcgatgtcagttattgtggctcgtgcgttgcctgacgtt
cgtgatggattaaagccagtacagcgtcgtattctatacggaatgagcgaattaggtgtt
actccagataagccttacaagaagagtgccagaattgttggggaagttatgggtaaattc
cacccacacggtgactcatcaatttatttagctatggctcacatggcacaagacttttca
tatcgttatatgttagttgatggacacggtaactttggttctgtcgatggtgatgaacca
gccgcaatgcgttataccgaagcaagaatgagtaaaattgctgttgaaatgcttcgtgat
attaacaaaaacacaattgactggcaaagaaactatgatgatactgaaagcgaaccagtt
gttttgccagctagaatccctaatttgctagttaatggtgcaaatgggatcgctgttggt
atgactactaatatcccaccacataacttgagtgaagtaattagtggacttcatatgttg
atgaggaatccagatgctacaactaaggatttgatgaaggaaataccaggtccagatttt
cctactggcggaattatcatggggcgtggcggaatttatcgtgcctatgagagtggcaag
ggtaatattgtagttcgtgctaagactaatattgagactgaaaagagcggccgtgaaaga
attatcgttagtgaaattccattcatggttaataaagctgaattagttaagaagattgca
gatttagcacgtgaaaaggtaattgatggaattactggggttcgtgatgaatcagatcaa
actggtatgagaatcacgattgatatccgcagggatgcaagtgcaagtgttgttttaaat
aatttgtttaagcaaacacaaatgcaagctaactttggtatgaacatggtggctattgtt
gatggtgctccacactatttaactttaaagcaaatgcttcaatactacttagatcaccaa
gaagatgttgtaactcgtagaactaaattcgaattagctaaagctgaagcaagagcgcat
atccttgaaggtttgagaattgctttggataatattgatgaaattgttcatattatccgt
agcagccattcaagtgatattgctaaggcaactttgattagtcgctttggtcttgatgat
aaacaatcacaagccattttggacatgcgtttagttcgattaactggtttggaacgtgat
aaagttgaagccgagtaccaggaattacaagctaaaatagctgattacaaagatatcttg
gccaagcctgaaagaatcgatcagattatctacgatgaacttttagatattcaaaaacgt
tttggggatgaacgtagaactgaaattggcgcaagtgaagttgtttcaattgaagatgaa
gatttgattgaaaagcaaaatattcttttaactgtaacgcataacggctacattaagaga
atgccaattcaagaatttaaaactcaaaatcgtggtggtaaaggtatcaaaggaatgggt
gtccaagatggtgactttattgaacacttaatctactcaagtactcatgatatgcttttg
ttctttactaatgcaggtaaagtttactcaaagaaggcttacgaaattcctgaatacggt
agaatggctaaagggttaccaattgtaaacctacttcaacttgaaaagggtgaaaaggtt
caagccgtagttaatattcctgaaggtgcagacgataattacttgttcttcgttactaag
atgggaacggttaagcgtactcacgtcagtgaatttgctaatattagaaatagcggatta
attgctcttactttgcgtgatggcgatgaattaagcaatgttttaactactgacggcaat
caaaatattttaatcggtacccacttaggctatgcagtaacgtttaatgaaagcgacgtt
cgtgctatgggtagaactgctgctggtgttcgtggtattaaccttcgtccagaagattat
gttgttggctctggtgtattaggtgcaaatgatcaagtcttggtaatctctgaaaaaggg
tatggtaagaggacacctgcgtcagaatatccagttaaaggccgtggtggtaagggtatt
aagacagcaaatattaccgaaaagaacggcccacttgctggtgtaatcgttcttgatagt
gatgaagatatcatggttattactactgatggtattatgattcgtttcaagactgccgat
gtatctcaaactagccgcagtactatcggtgttcgtttaatcaaagttaatgacgatagc
cgtgtagccagcttaacaattgttccaactgaagcagaacaggatgaaattggtgacgaa
gattctgaaaaataa
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