Lactobacillus acidophilus NCFM: LBA0213
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Entry
LBA0213 CDS
T00231
Name
(GenBank) met-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
lac
Lactobacillus acidophilus NCFM
Pathway
lac00450
Selenocompound metabolism
lac00970
Aminoacyl-tRNA biosynthesis
lac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LBA0213
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LBA0213
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lac01007
]
LBA0213
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lac03016
]
LBA0213
Enzymes [BR:
lac01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
LBA0213
Amino acid related enzymes [BR:
lac01007
]
Aminoacyl-tRNA synthetase
Class I (U)
LBA0213
Transfer RNA biogenesis [BR:
lac03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LBA0213
Prokaryotic type
Other AARSs
LBA0213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA_bind
tRNA-synt_1e
Anticodon_3
Anticodon_1
tRNA-synt_1f
DUF6756
rRNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AAV42108
UniProt:
Q5FMG6
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All DBs
Position
209479..211455
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AA seq
658 aa
AA seq
DB search
MADKDTFYITTPIYYPSGRLTIGNAYTTIAADTMARYKRSQGFDTFFLTGTDEHGLKIEQ
KAEAQGIKPKEFVDKMADSYKKLWKSLNISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIY
LGEYTGWYSVEDEEYFTESQLAEVYKDDNGNVIGGKAPSGHEVRLVKEPSYFFKMSKYAD
RLVEYYKEHPDFILPHSREKEMLNNFIKPGLEDLSVTRTTVNWGIPVPSDPKHVVYVWID
ALSNYITALGYGSDNDALFKKYWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKHIIGH
GWVLMKNGKMSKSKGNAVYPESLTSRYGVDPLRYYLMRALPFGADGIFTPEDFVERINYD
LANDLGNLLNRTVSMINQYQNGQVAPVPVAQDKFGKELQDTAASVIADYREYMDSLHFSQ
ALDSIWKLVARANKYIDETTPWVLNKEGKIEELSHVMSNLAESLRLIAVMIEPVMTETAP
KMFEQLGLNWNDEDERKLAFNDFGWNTKVVEKPTPIFPRLKAEEEIKYIKDEMAKAKPKK
TTRSEQKKTDEITIDDFDKVKIQVGQILSVEPVKGSSKLLMFKLDFGDGKERQILSGIRK
FYPDASELLDKKVLAVTNLKPRKMLGHLSEGMLLSSEKDGEIKLALVEDEHANGAELG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagatactttttatattacaactccaatttactatccatctggtagattg
actatcggtaacgcttataccacaattgcagctgatactatggctcgttacaaacgtagc
caaggttttgatacatttttcttaactggtaccgatgaacacggtttaaaaattgaacaa
aaggctgaagctcaaggaattaaacctaaggaatttgtagataagatggcagattcttac
aagaaattgtggaagagcttgaatatttcttatgacaagtttattagaactactgatgaa
gaacacgttaaggctgttcaaaagatttttgaaaagcttttaaagaaaggcgacatctac
ttaggtgaatacaccggttggtactcagttgaagatgaagaatactttactgaatcacaa
cttgctgaagtatataaagacgataatggcaatgttatcggtggtaaagctcctagtggt
cacgaagttcgtttagttaaagaaccatcatactttttcaagatgagtaaatatgctgat
agattggttgaatactacaaggaacatcctgatttcattttgcctcactcacgtgaaaaa
gaaatgcttaataacttcattaagccaggactggaagatctttcagtaactcgtactacg
gttaactggggtattcctgttccaagtgatccaaaacatgtagtttatgtatggattgat
gctctttcaaactatattactgcattaggctatggctcagataatgatgctttatttaag
aaatactggcctgcagatgttcacttagtaggtaaggaaattgtccgcttccacactatt
tattggccaatcatgctgatggctcttgatttgccacttccaaagcatattattggtcac
ggttgggtattgatgaagaatggtaagatgtctaaatctaaaggcaacgcagtttaccca
gagtcacttactagtcgttacggcgttgacccacttcgttactatttaatgcgtgcactt
ccatttggtgcagatggtatctttactccagaagactttgttgaaagaattaactatgat
ctagcaaatgacttagggaacttattaaaccgtactgtatcaatgattaatcaatatcaa
aacggtcaagtagccccagttccagtagcacaagataaattcggcaaagaattgcaagat
actgctgctagtgtaattgctgactatagagaatacatggactcactccacttctcacaa
gcattagatagcatctggaaacttgttgcacgtgctaataaatacatcgatgaaactact
ccttgggtacttaataaggaaggcaagattgaagaactttcacatgtaatgtctaatttg
gcagaaagtcttcgcttgattgcagttatgattgaaccagttatgactgaaacagcacct
aagatgtttgagcaacttggcttgaactggaatgatgaagatgaaagaaaattagcattt
aatgactttggctggaatactaaggtggttgaaaagccaactccaatcttcccacgtctt
aaagctgaagaagaaattaagtacatcaaagatgaaatggctaaagctaagccaaagaag
accactagaagtgaacaaaagaagaccgacgaaattactattgatgactttgataaggta
aagattcaagtaggccaaattttatcagtagaacccgttaagggatcaagtaagcttttg
atgtttaagctcgactttggtgatggtaaagaacgtcaaattttaagtggtatccgtaag
ttttatccagatgctagtgaacttttagataaaaaggtattagctgttactaacttgaag
ccacgtaagatgctaggtcatttaagtgaaggcatgcttttatctagtgaaaaagatggc
gagattaagttagctttagttgaagatgaacatgcaaatggagctgaattaggttaa
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