Lactobacillus acidophilus NCFM: LBA0322
Help
Entry
LBA0322 CDS
T00231
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lac
Lactobacillus acidophilus NCFM
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lac03016
]
LBA0322
Enzymes [BR:
lac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LBA0322
Transfer RNA biogenesis [BR:
lac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LBA0322
Prokaryotic type
LBA0322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF6459
Motif
Other DBs
NCBI-ProteinID:
AAV42214
UniProt:
Q5FM60
LinkDB
All DBs
Position
306863..307651
Genome browser
AA seq
262 aa
AA seq
DB search
MLTRYKMTMAYDGHLFHGFQLQPDQRTVQGTVEDALKKMTKGKRIIVQGSGRTDAGVHAI
GQVIHFDYPGKEIPANRMILALNSMMPTDIVFTDCQIVDEDFHARYSIKGKWYRYRLSLD
YFVNPFKRFYTGHFPYQLDLEKMRIAAQDLLGKHDFTSFAASGGQIKDKVRTIYYINITK
DEKENEIVFDFIGSGFLYNMVRIMVAALLEIGNERRPLHDLRRVIAAKDRQEVRQTAQGS
GLYLYHVFYDEIPQKYRQDQYL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttaactagatataaaatgacaatggcctatgatgggcacttatttcatggctttcaa
ttacagcctgatcaaagaactgttcagggaacagttgaagatgctttgaaaaaaatgact
aaggggaaaagaataattgttcaaggttctggtagaactgatgcaggtgttcatgcaatt
ggacaagtgatacattttgattatccaggcaaagaaataccagcgaataggatgatttta
gcattaaattcgatgatgccaacggatattgtatttacggattgtcagatagttgatgag
gactttcatgctagatattcaataaaaggaaagtggtatcgatatcgattaagtttagat
tactttgtaaacccatttaaaagattttatacagggcattttccttatcaattagatctt
gaaaaaatgagaatagcggcccaagatctattaggaaaacacgattttactagttttgct
gcaagtggtggacaaattaaagataaagtcagaacaatttattatattaatatcactaag
gatgaaaaagaaaatgaaatagtatttgattttatcggttcaggttttctttataatatg
gttagaattatggtcgcagccttacttgaaataggtaatgagcgtcgacctttacatgac
ttgcggcgagtaattgcagctaaagatagacaagaagttcgacaaacagctcagggaagt
ggcttatatttgtatcatgttttttatgatgaaataccgcaaaaatatcgtcaggaccag
tatttataa
DBGET
integrated database retrieval system
