Lactobacillus acidophilus NCFM: LBA0376
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Entry
LBA0376 CDS
T00231
Name
(GenBank) DNA polymerase III (DNA directed) gamma-tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lac
Lactobacillus acidophilus NCFM
Pathway
lac03030
DNA replication
lac03430
Mismatch repair
lac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBA0376
03430 Mismatch repair
LBA0376
03440 Homologous recombination
LBA0376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lac03032
]
LBA0376
03400 DNA repair and recombination proteins [BR:
lac03400
]
LBA0376
Enzymes [BR:
lac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBA0376
DNA replication proteins [BR:
lac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBA0376
DNA repair and recombination proteins [BR:
lac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBA0376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
DNA_pol3_gamma3
TIP49
AAA_19
AAA_22
AAA_5
AAA_30
AAA_7
AAA_assoc_2
AAA_16
AAA_24
AAA_14
AAA_2
nSTAND3
Sigma54_activat
RCF1-5-like_lid
AAA_18
Mg_chelatase
DUF815
TsaE
Motif
Other DBs
NCBI-ProteinID:
AAV42267
UniProt:
Q5FM07
LinkDB
All DBs
Position
351479..353269
Genome browser
AA seq
596 aa
AA seq
DB search
MAYQALYRKWRPRTFDSVIGQEAITDTLKNAIKRGKVSHAFLFAGPRGTGKTSCAKIFAK
ALNCTNLQDGEPCNECANCIAANEGSMPDIMEIDAASNNGVDEIREIRDKVKYAPTEGKY
KVYIIDEVHMLSIGAFNALLKTLEEPPEHVVFILATTELQKVPATIISRTQRYNFKRISK
EDLENRMKYILDQENIKYEVKALNVIAQVADGGMRDALSILDQLLSYEKDSVNYEDALQI
TGFAARENIEKILLALLEQNSVNALKLAQESLDQGASSKNILDELIDMATKSLMVIKANE
DQGAFLTENFIEKIKDVPTDTYYRLITLANNALNDLRYTNQQQIPLKVFLVEASSNVQEK
TSKSVSAAVVQPPADSSAMQAELAALKKQVVELTQKMTQLTDRPSFNKDQVFHLDTAVPK
HVHKIVEKQQAAPVKKPVKKIKKTTAENRKQVYHVLEHATRDDLEAIKNVWPDLQSVLAV
SERALLDVLEPVAASPDQVVMKCKYTLWFENASSDSDLLDKLTDQIEKFAKHYYGIVLVP
DEDWLTVRKEFVESHKEELLAKKKQQIEDKDAESKEDIKVVDTAKELFGDAVTIKD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagcgctatatcgtaaatggcgaccacggacttttgatagtgtgattggt
caagaagcgattacagatacccttaagaatgcaattaaaagaggaaaagtatctcatgct
tttttatttgcaggtccgcgaggtactggtaaaacttcttgtgcaaagatatttgctaaa
gcgttgaactgtactaatcttcaagatggtgagccctgcaatgaatgcgctaattgtatt
gcagctaatgagggttcaatgcctgatatcatggaaattgatgccgcttcaaataacggt
gttgatgaaattcgtgaaattcgtgataaggtaaaatatgctccaacagaaggaaaatat
aaagtttatattatcgatgaagttcacatgttgtcgattggtgcatttaatgctttactt
aaaacgttagaagaaccaccagagcatgtggtgttcattttggcaacaacggagttgcaa
aaagtaccagctacgattatttcaagaacacaacgttacaactttaagcgtatttcaaaa
gaagatctagaaaataggatgaaatatattctagatcaagaaaatattaaatatgaagtt
aaagctttgaatgtaatcgcacaagtagccgatgggggaatgagagatgccctcagtatt
ctagatcagttgcttagctatgaaaaagatagtgtgaattatgaagatgcattacaaata
actggttttgcggcaagagaaaatattgagaaaattttgttagcattattagagcaaaat
tctgttaatgcattaaaattagctcaagaatccttggatcaaggtgcgagttccaaaaac
atattagatgaattgatcgacatggctactaagagcttaatggtgattaaagctaatgaa
gatcaaggggcatttttaacagagaattttattgaaaaaatcaaagatgtgccaacggat
acttattatcgcctgattactcttgctaataatgcattaaatgatttgcgttacactaat
caacaacaaataccattaaaggtatttttagtggaagcaagtagtaatgttcaagaaaaa
acaagtaagagtgtttcagctgctgtagtgcaaccgcctgctgattcaagtgcgatgcaa
gcagaactagctgcattaaaaaagcaggtagttgaattgacgcaaaaaatgacacagcta
actgatcgacctagcttcaataaagatcaagtttttcatttggatacggctgtgcctaag
catgtgcataaaattgtagaaaaacaacaggcagcaccagttaagaagccggtcaaaaaa
atcaaaaaaaccacagcagaaaaccgcaaacaggtttatcatgttcttgagcatgcaact
agggatgatctagaagctatcaaaaatgtatggccagatttgcaatctgtacttgctgtt
tcagaaagagcattgcttgatgttcttgagcctgtggcagctagtccagatcaggttgta
atgaagtgtaaatatacattatggtttgaaaatgctagctcggacagtgatttattagat
aaattgacagatcaaattgaaaaattcgctaagcattattatggaattgttttagttcca
gatgaagattggttaacagtaaggaaagaatttgttgaaagtcataaagaggaattactg
gctaaaaaaaagcagcaaattgaagataaagatgcagaatcaaaagaagacatcaaagta
gttgatacggcaaaagaactttttggtgatgcagttactataaaagattaa
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